RNA–Protein interactions for RNA: ENST00000446276.5

MACF1-208, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 5

Gene MACF1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-208ENST00000446276 PON1P27169 355 aa12.72□□□□□ -0.37
MACF1-208ENST00000446276 RASIP1Q5U651 963 aa12.72□□□□□ -0.37
MACF1-208ENST00000446276 SCARA3Q6AZY7 606 aa12.72□□□□□ -0.37
MACF1-208ENST00000446276 VSTM4Q8IW00 320 aa12.72□□□□□ -0.37
MACF1-208ENST00000446276 ZNF689Q96CS4 500 aaPredicted RBP12.72□□□□□ -0.37
MACF1-208ENST00000446276 MTIF3Q9H2K0 278 aaKnown RBP12.72□□□□□ -0.37
MACF1-208ENST00000446276 TBC1D13Q9NVG8 400 aa12.72□□□□□ -0.37
MACF1-208ENST00000446276 GEMIN8Q9NWZ8 242 aaKnown RBP12.72□□□□□ -0.37
MACF1-208ENST00000446276 CEP290O15078 2479 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 GTF2F1P35269 517 aaKnown RBP eCLIP12.71□□□□□ -0.37
MACF1-208ENST00000446276 GATMP50440 423 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 RBP5P82980 135 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 DSC1Q08554 894 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 TUSC3Q13454 348 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 TRPC3Q13507 836 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 PTPN21Q16825 1174 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 DPY19L2P1Q6NXN4 242 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 TRIM65Q6PJ69 517 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 TMEM130Q8N3G9 435 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 PHOSPHO2Q8TCD6 241 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 MRPL9Q9BYD2 267 aaKnown RBP12.71□□□□□ -0.37
MACF1-208ENST00000446276 RC3H2Q9HBD1 1191 aaKnown RBP12.71□□□□□ -0.37
MACF1-208ENST00000446276 PLCB1Q9NQ66 1216 aa12.71□□□□□ -0.37
MACF1-208ENST00000446276 ITIH6Q6UXX5 1313 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 PIRO00625 290 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 ZC3H11AO75152 810 aaKnown RBP eCLIP12.71□□□□□ -0.385e-16■■■□□ 16.9
MACF1-208ENST00000446276 LRRN2O75325 713 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 CDC25BP30305 580 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 POLR2BP30876 1174 aaKnown RBP12.71□□□□□ -0.38
MACF1-208ENST00000446276 RPL9P32969 192 aaKnown RBP12.71□□□□□ -0.38
MACF1-208ENST00000446276 PIK3CAP42336 1068 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 SGSM1Q2NKQ1 1148 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 C9orf57Q5W0N0 161 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 INTS2Q9H0H0 1204 aaKnown RBP12.71□□□□□ -0.38
MACF1-208ENST00000446276 XYLT2Q9H1B5 865 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 VRTNQ9H8Y1 702 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 GOLGA2P5Q9HBQ8 144 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 AGAP1Q9UPQ3 857 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 SLC4A7Q9Y6M7 1214 aa12.71□□□□□ -0.38
MACF1-208ENST00000446276 TBKBP1A7MCY6 615 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 GJB5O95377 273 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 STAU1O95793 577 aaKnown RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 ASS1P00966 412 aaKnown RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 KRT19P08727 400 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 ATICP31939 592 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 KLK7P49862 253 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 MYL6P60660 151 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 SPECC1LQ69YQ0 1117 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 ZNF280BQ86YH2 543 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 LRRC52Q8N7C0 313 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 TAF4BQ92750 862 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 SLC9A7Q96T83 725 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 GDF15Q99988 308 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 PDCD11Q14690 1871 aaKnown RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 CCDC66A2RUB6 948 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 DDHD2O94830 711 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 RNASELQ05823 741 aaKnown RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 TMCO2Q7Z6W1 182 aaPredicted RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 COLGALT2Q8IYK4 626 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 DDX27Q96GQ7 796 aaKnown RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 UROC1Q96N76 676 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
MACF1-208ENST00000446276 IMPG2Q9BZV3 1241 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 SIX2Q9NPC8 291 aa12.7□□□□□ -0.38
MACF1-208ENST00000446276 HTRA4P83105 476 aaPredicted RBP12.69□□□□□ -0.38
MACF1-208ENST00000446276 UPP1Q16831 310 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 FIGNQ5HY92 759 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 WDR44Q5JSH3 913 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 KLHDC7AQ5VTJ3 777 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 FAM117BQ6P1L5 589 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 LRRC43Q8N309 656 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 CCDC150Q8NCX0 1101 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 PCMTD1Q96MG8 357 aaPredicted RBP12.69□□□□□ -0.38
MACF1-208ENST00000446276 PI4K2AQ9BTU6 479 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 NRDE2Q9H7Z3 1164 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 APEX2Q9UBZ4 518 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 FBXL5Q9UKA1 691 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 CASTOR2A6NHX0 329 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 PPEF2O14830 753 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 B4GALT3O60512 393 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 NOL4O94818 638 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 PNPLA4P41247 253 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 CLCNKBP51801 687 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 C9orf50Q5SZB4 431 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 PHLDB3Q6NSJ2 640 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 CMTR2Q8IYT2 770 aaKnown RBP12.69□□□□□ -0.38
MACF1-208ENST00000446276 NEK11Q8NG66 645 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 IQCDQ96DY2 449 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 HPDLQ96IR7 371 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 FAXDC2Q96IV6 333 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 NT5C1BQ96P26 610 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 FAM193BQ96PV7 902 aaPredicted RBP12.69□□□□□ -0.38
MACF1-208ENST00000446276 NUP58Q9BVL2 599 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 YY1AP1Q9H869 796 aa12.69□□□□□ -0.38
MACF1-208ENST00000446276 FAM207AQ9NSI2 230 aaPredicted RBP12.69□□□□□ -0.38
MACF1-208ENST00000446276 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.69□□□□□ -0.388e-7■■■■□ 20.8
MACF1-208ENST00000446276 H0YGN5 161 aa12.68□□□□□ -0.38
MACF1-208ENST00000446276 PODXLO00592 558 aa12.68□□□□□ -0.38
MACF1-208ENST00000446276 ATP2A2P16615 1042 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms