RNA–Protein interactions for RNA: ENST00000443660.5

MRPL40-202, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 954 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-202ENST00000443660 LIMK1P53667 647 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 CTXN3Q4LDR2 81 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 ATF7IP2Q5U623 682 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 C3orf58Q8NDZ4 430 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 IFT74Q96LB3 600 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 CCDC113Q9H0I3 377 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 TUFT1Q9NNX1 390 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 FBXL5Q9UKA1 691 aa16.31■□□□□ 0.2
MRPL40-202ENST00000443660 STK36Q9NRP7 1315 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 K7ESF4 209 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 PODXLO00592 558 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 NRG2O14511 850 aaPredicted RBP16.3■□□□□ 0.2
MRPL40-202ENST00000443660 CHADO15335 359 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 NEMFO60524 1076 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 GJA1P17302 382 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 SHC2P98077 582 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 TWF1Q12792 350 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 NR5A1Q13285 461 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 PADI6Q6TGC4 694 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 BSNDQ8WZ55 320 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 CCDC94Q9BW85 323 aaPredicted RBP16.3■□□□□ 0.2
MRPL40-202ENST00000443660 ARRDC1-AS1Q9H2J1 176 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 RBM12Q9NTZ6 932 aaKnown RBP16.3■□□□□ 0.2
MRPL40-202ENST00000443660 PDRG1Q9NUG6 133 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 CEP72Q9P209 647 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 AFF4Q9UHB7 1163 aaKnown RBP16.3■□□□□ 0.2
MRPL40-202ENST00000443660 CACNA1GO43497 2377 aa16.3■□□□□ 0.2
MRPL40-202ENST00000443660 ARHGEF35A5YM69 484 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 FAM205CA6NFA0 338 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 SLC38A8A6NNN8 435 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 K7ERI5 159 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 MOSPD3O75425 235 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 ZNF806P0C7X5 589 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 SPATA31C1P0DKV0 1188 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 CYP11B2P19099 503 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 HOXA6P31267 233 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 RPL9P32969 192 aaKnown RBP16.29■□□□□ 0.2
MRPL40-202ENST00000443660 SCRN1Q12765 414 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 MRPL58Q14197 206 aaKnown RBP16.29■□□□□ 0.2
MRPL40-202ENST00000443660 TEAD2Q15562 447 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 WDR5BQ86VZ2 330 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 RALGPS2Q86X27 583 aaPredicted RBP16.29■□□□□ 0.2
MRPL40-202ENST00000443660 SYNPOQ8N3V7 929 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 APPL2Q8NEU8 664 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 LOXL4Q96JB6 756 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 NOTCH4Q99466 2003 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 USP24Q9UPU5 2620 aa16.29■□□□□ 0.2
MRPL40-202ENST00000443660 ARNTLO00327 626 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 MARCKSP29966 332 aaPredicted RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 GRM5P41594 1212 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 EPHA5P54756 1037 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 SOX4Q06945 474 aaPredicted RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 SF3A2Q15428 464 aaKnown RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 NT5DC1Q5TFE4 455 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 ZNF280DQ6N043 979 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 CENPQQ7L2Z9 268 aaPredicted RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 CACNA2D4Q7Z3S7 1137 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 HAUS6Q7Z4H7 955 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 MTMR9Q96QG7 549 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 TM6SF1Q9BZW5 370 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 SH2B1Q9NRF2 756 aaPredicted RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 ORC3Q9UBD5 711 aaPredicted RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 RALYQ9UKM9 306 aaKnown RBP16.28■□□□□ 0.2
MRPL40-202ENST00000443660 TNFSF13BQ9Y275 285 aa16.28■□□□□ 0.2
MRPL40-202ENST00000443660 MYBPHLA2RUH7 354 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 SPECC1L-ADORA2AF8WAN1 911 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 DPYSL4O14531 572 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 TM4SF5O14894 197 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 EDN1P05305 212 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 CPB1P15086 417 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 SOX9P48436 509 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 OSTNP61366 133 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 FCHO2Q0JRZ9 810 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 XKR4Q5GH76 650 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 STPG1Q5TH74 334 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 ALKAL1Q6UXT8 129 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 Q6ZS52 159 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 ERMNQ8TAM6 284 aa16.27■□□□□ 0.2
MRPL40-202ENST00000443660 POLR3CQ9BUI4 534 aaPredicted RBP16.27■□□□□ 0.2
MRPL40-202ENST00000443660 ARID2Q68CP9 1835 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 F5P12259 2224 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 MED24O75448 989 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 PROS1P07225 676 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 MCM4P33991 863 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 EPHB3P54753 998 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 PLD1Q13393 1074 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 CCDC6Q16204 474 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 ARHGAP29Q52LW3 1261 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 RNF19BQ6ZMZ0 732 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 TTC8Q8TAM2 541 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 SHKBP1Q8TBC3 707 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 GAB3Q8WWW8 586 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 KIFAP3Q92845 792 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 TNFRSF25Q93038 417 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 SUSD3Q96L08 255 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 ACAP3Q96P50 834 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 TCHPQ9BT92 498 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 KIFC3Q9BVG8 833 aa16.26■□□□□ 0.19
MRPL40-202ENST00000443660 CFAP47Q6ZTR5 3102 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms