RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SPATA32Q96LK8 384 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 FAM213AQ9BRX8 229 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 PRKD2Q9BZL6 878 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 RAPGEFL1Q9UHV5 662 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 RCOR1Q9UKL0 485 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 KCNH3Q9ULD8 1083 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 USTQ9Y2C2 406 aa22.86■■□□□ 1.25
CDKN3-204ENST00000442975 H7C4K7 107 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 ASGR2P07307 311 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 CASP1P29466 404 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 GBP2P32456 591 aaPredicted RBP22.85■■□□□ 1.25
CDKN3-204ENST00000442975 ZXDAP98168 799 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 ZBTB6Q15916 424 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 SPATA1Q5VX52 437 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 ZNF280DQ6N043 979 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 CYP26C1Q6V0L0 522 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 GET4Q7L5D6 327 aaPredicted RBP22.85■■□□□ 1.25
CDKN3-204ENST00000442975 CEP57L1Q8IYX8 460 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 APPL2Q8NEU8 664 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 LEO1Q8WVC0 666 aaPredicted RBP22.85■■□□□ 1.25
CDKN3-204ENST00000442975 BLZF1Q9H2G9 400 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 TMEM206Q9H813 350 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 WDR6Q9NNW5 1121 aaKnown RBP22.85■■□□□ 1.25
CDKN3-204ENST00000442975 PCDHB8Q9UN66 801 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 POLIQ9UNA4 740 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 PLXNA3P51805 1871 aa22.85■■□□□ 1.25
CDKN3-204ENST00000442975 PRR33A8MZF0 331 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 PPEF2O14830 753 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 CCL16O15467 120 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 AFMP43652 599 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 ROR1Q01973 937 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 CTXN3Q4LDR2 81 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 FAM26FQ5R3K3 315 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 DSTYKQ6XUX3 929 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 TSPAN18Q96SJ8 248 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 PYM1Q9BRP8 204 aaKnown RBP22.84■■□□□ 1.25
CDKN3-204ENST00000442975 CBWD1Q9BRT8 395 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 RHOBTB2Q9BYZ6 727 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 LIMD1Q9UGP4 676 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 DERAQ9Y315 318 aa22.84■■□□□ 1.25
CDKN3-204ENST00000442975 ADRB2P07550 413 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 MTMR3Q13615 1198 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 SLC8B1Q6J4K2 584 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 ARMCX5Q6P1M9 558 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 CRELD2Q6UXH1 353 aaPredicted RBP22.83■■□□□ 1.25
CDKN3-204ENST00000442975 GRAMD1CQ8IYS0 662 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 ZDHHC14Q8IZN3 488 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 PLCD3Q8N3E9 789 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 C7orf25Q9BPX7 421 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 ASB7Q9H672 318 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 RBAKQ9NYW8 714 aaPredicted RBP22.83■■□□□ 1.25
CDKN3-204ENST00000442975 FBXL5Q9UKA1 691 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 C2CD2Q9Y426 696 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 ATP6V1DQ9Y5K8 247 aa22.83■■□□□ 1.25
CDKN3-204ENST00000442975 TIMM13Q9Y5L4 95 aaPredicted RBP22.83■■□□□ 1.25
CDKN3-204ENST00000442975 GOLGA8IPA6NC78 632 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 GOLGA8JA6NMD2 632 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 PRRG1O14668 218 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 XYLBO75191 536 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 IL18RAPO95256 599 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 HNRNPA1P09651 372 aaKnown RBP eCLIP22.82■■□□□ 1.24
CDKN3-204ENST00000442975 GARTP22102 1010 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 C9orf57Q5W0N0 161 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 TRIM67Q6ZTA4 783 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 GRASPQ7Z6J2 395 aaPredicted RBP22.82■■□□□ 1.24
CDKN3-204ENST00000442975 ZSWIM2Q8NEG5 633 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 PCIF1Q9H4Z3 704 aa22.82■■□□□ 1.24
CDKN3-204ENST00000442975 WDR27A2RRH5 827 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 TMEM221A6NGB7 291 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 M0R296 226 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 CPB1P15086 417 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 PFKFB1P16118 471 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 HOXA9P31269 272 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 ELF1P32519 619 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 YWHAHQ04917 246 aaPredicted RBP22.81■■□□□ 1.24
CDKN3-204ENST00000442975 CNNM4Q6P4Q7 775 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 UNC13DQ70J99 1090 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 USP37Q86T82 979 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 BRSK2Q8IWQ3 736 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 EFCAB13Q8IY85 973 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 SERTAD1Q9UHV2 236 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 SORCS3Q9UPU3 1222 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 HCN4Q9Y3Q4 1203 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 CITO14578 2027 aa22.81■■□□□ 1.24
CDKN3-204ENST00000442975 VWA8A3KMH1 1905 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 A0A1B0GVL5 298 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 M0QZQ0 153 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 N4BP1O75113 896 aaKnown RBP22.8■■□□□ 1.24
CDKN3-204ENST00000442975 AARSP49588 968 aaKnown RBP eCLIP22.8■■□□□ 1.24
CDKN3-204ENST00000442975 NTHL1P78549 312 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 TFAMQ00059 246 aaKnown RBP22.8■■□□□ 1.24
CDKN3-204ENST00000442975 CUL4BQ13620 913 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 HFE2Q6ZVN8 426 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 SMOC2Q9H3U7 446 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 CYP4F11Q9HBI6 524 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 DPP3Q9NY33 737 aa22.8■■□□□ 1.24
CDKN3-204ENST00000442975 SPTLC1O15269 473 aa22.79■■□□□ 1.24
CDKN3-204ENST00000442975 EIF3DO15371 548 aaKnown RBP eCLIP22.79■■□□□ 1.24
CDKN3-204ENST00000442975 ACTN4O43707 911 aaKnown RBP22.79■■□□□ 1.24
CDKN3-204ENST00000442975 EXTL3O43909 919 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms