RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 ZNF512Q96ME7 567 aaPredicted RBP22.39■■□□□ 1.17
TMEM50B-204ENST00000442441 PTPRHQ9HD43 1115 aa22.39■■□□□ 1.17
TMEM50B-204ENST00000442441 NUB1Q9Y5A7 615 aa22.39■■□□□ 1.17
TMEM50B-204ENST00000442441 COL4A2P08572 1712 aa22.39■■□□□ 1.17
TMEM50B-204ENST00000442441 CHD8Q9HCK8 2581 aa22.39■■□□□ 1.17
TMEM50B-204ENST00000442441 PHLPP2Q6ZVD8 1323 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 KCNE1P15382 129 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 RPL9P32969 192 aaKnown RBP22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 SPEM2Q0P670 501 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 ORC2Q13416 577 aaPredicted RBP22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 SAFBQ15424 915 aaKnown RBP eCLIP22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 ZNF174Q15697 407 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 ECM1Q16610 540 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 CTXN3Q4LDR2 81 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 HS6ST3Q8IZP7 471 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 CEP72Q9P209 647 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 MAFFQ9ULX9 164 aa22.38■■□□□ 1.17
TMEM50B-204ENST00000442441 TICRRQ7Z2Z1 1910 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 CCDC169A6NNP5 214 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 MOSPD3O75425 235 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 CCT6AP40227 531 aaKnown RBP22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 VIPR2P41587 438 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 LEMD2Q8NC56 503 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 ACAP3Q96P50 834 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 MRPL4Q9BYD3 311 aaKnown RBP22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 TRPV4Q9HBA0 871 aa22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 AFF4Q9UHB7 1163 aaKnown RBP22.37■■□□□ 1.17
TMEM50B-204ENST00000442441 ZNF263O14978 683 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 RETP07949 1114 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 MCF2P10911 925 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 MYL4P12829 197 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 NPTX2P47972 431 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 CXCL12P48061 93 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 EPHA5P54756 1037 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 PEX3P56589 373 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 GUCY1B3Q02153 619 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 TWF1Q12792 350 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 ZNF280DQ6N043 979 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 MFSD6LQ8IWD5 586 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 ZSCAN18Q8TBC5 510 aaPredicted RBP22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 C18orf25Q96B23 403 aaPredicted RBP22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 SUSD3Q96L08 255 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 TARS2Q9BW92 718 aaKnown RBP22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 TMEM134Q9H6X4 195 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 ASAH2Q9NR71 780 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 CNTN3Q9P232 1028 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 KIAA1024Q9UPX6 916 aa22.36■■□□□ 1.17
TMEM50B-204ENST00000442441 LRP3O75074 770 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 CHRNB1P11230 501 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 GJA1P17302 382 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 CCNE1P24864 410 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 MCM4P33991 863 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 PRR23BQ6ZRT6 265 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 TAS1R3Q7RTX0 852 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 APPL2Q8NEU8 664 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 NETO1Q8TDF5 533 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 TCHPQ9BT92 498 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 DYNC1LI1Q9Y6G9 523 aaKnown RBP22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 MAP1BP46821 2468 aaKnown RBP22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 CITO14578 2027 aa22.35■■□□□ 1.17
TMEM50B-204ENST00000442441 ARNTLO00327 626 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 ADRB1P08588 477 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 PROZP22891 400 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 FXR2P51116 673 aaKnown RBP eCLIP22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 MLLT6P55198 1093 aaPredicted RBP22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 SATB1Q01826 763 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 TEAD2Q15562 447 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 DDX12PQ92771 950 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 TBC1D32Q96NH3 1257 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 GPR88Q9GZN0 384 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 DDX19AQ9NUU7 478 aaKnown RBP22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 ARHGAP28Q9P2N2 729 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 LRWD1Q9UFC0 647 aa22.34■■□□□ 1.17
TMEM50B-204ENST00000442441 NCANO14594 1321 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 HEPACAM2A8MVW5 462 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 ABLIM1O14639 778 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 SLC30A4O14863 429 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 MEFVO15553 781 aaPredicted RBP22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 CPB1P15086 417 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 DMP1Q13316 513 aaPredicted RBP22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 SIM2Q14190 667 aaPredicted RBP22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 GAS6Q14393 721 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 TTC38Q5R3I4 469 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 MPZL3Q6UWV2 235 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 RNF19BQ6ZMZ0 732 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 DAW1Q8N136 415 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 SPEM1Q8N4L4 309 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 CSGALNACT1Q8TDX6 532 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 E2F7Q96AV8 911 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 MSANTD3Q96H12 275 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 SLITRK6Q9H5Y7 841 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 PCDHB8Q9UN66 801 aa22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 RBM19Q9Y4C8 960 aaKnown RBP22.33■■□□□ 1.17
TMEM50B-204ENST00000442441 HIP1RO75146 1068 aa22.32■■□□□ 1.16
TMEM50B-204ENST00000442441 PTGDRQ13258 359 aa22.32■■□□□ 1.16
TMEM50B-204ENST00000442441 C1orf228Q6PIY5 440 aa22.32■■□□□ 1.16
TMEM50B-204ENST00000442441 YAF2Q8IY57 180 aa22.32■■□□□ 1.16
TMEM50B-204ENST00000442441 SHKBP1Q8TBC3 707 aa22.32■■□□□ 1.16
TMEM50B-204ENST00000442441 FOXP1Q9H334 677 aaPredicted RBP22.32■■□□□ 1.16
TMEM50B-204ENST00000442441 KMT5AQ9NQR1 393 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms