RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 RPF1Q9H9Y2 349 aaKnown RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 PTPRHQ9HD43 1115 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 SLC2A4RGQ9NR83 387 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 GDE1Q9NZC3 331 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 CNTN3Q9P232 1028 aa8.48□□□□□ -1.05
CD44-211ENST00000442151 MRPS17Q9Y2R5 130 aaKnown RBP8.48□□□□□ -1.05
CD44-211ENST00000442151 ANHXE9PGG2 379 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 TBCAO75347 108 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 FGF19O95750 216 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 RPL17P18621 184 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 PROZP22891 400 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MCL1Q07820 350 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 TCF15Q12870 199 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 NAB2Q15742 525 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 PABPC1LQ4VXU2 614 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 SLC8B1Q6J4K2 584 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 ZNF280DQ6N043 979 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 ZC3H14Q6PJT7 736 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 GRASPQ7Z6J2 395 aaPredicted RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 SIX5Q8N196 739 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MYCT1Q8N699 235 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 DTWD2Q8NBA8 298 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 HASPINQ8TF76 798 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 E2F7Q96AV8 911 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 SNX27Q96L92 541 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MYADMQ96S97 322 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 KIFC3Q9BVG8 833 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 OSBPL6Q9BZF3 934 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 LRRC27Q9C0I9 530 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 PARVGQ9HBI0 331 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 UBQLN1Q9UMX0 589 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 DERAQ9Y315 318 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MRPS23Q9Y3D9 190 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 MTCL1Q9Y4B5 1905 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 TECTAO75443 2155 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 CFHP08603 1231 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MAPTP10636 758 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 ATF2P15336 505 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MCM4P33991 863 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 SLC12A3P55017 1021 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 OSTNP61366 133 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 CTXN3Q4LDR2 81 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 DSTYKQ6XUX3 929 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 HAUS6Q7Z4H7 955 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 CCDC105Q8IYK2 499 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 TMEM161BQ8NDZ6 487 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 BEST2Q8NFU1 509 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 SLC7A14Q8TBB6 771 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 RABGGTAQ92696 567 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 HVCN1Q96D96 273 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 SUSD3Q96L08 255 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 B3GALT6Q96L58 329 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MMTAG2Q9BU76 263 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 SEL1LQ9UBV2 794 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 AFF4Q9UHB7 1163 aaKnown RBP8.47□□□□□ -1.05
CD44-211ENST00000442151 CDH22Q9UJ99 828 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 EXOC7Q9UPT5 735 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 SIT1Q9Y3P8 196 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 CDY1Q9Y6F8 540 aa8.47□□□□□ -1.05
CD44-211ENST00000442151 MYO10Q9HD67 2058 aa8.46□□□□□ -1.05
CD44-211ENST00000442151 OR6C75A6NL08 312 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 SFI1A8K8P3 1242 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 H0Y858 1186 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 OGTO15294 1046 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 CCL16O15467 120 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 TRAK2O60296 914 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 ABLIM3O94929 683 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 HARSP12081 509 aaKnown RBP8.46□□□□□ -1.06
CD44-211ENST00000442151 DDIT3P35638 169 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 NBL1P41271 181 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 NCKAP1LP55160 1127 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 SMARCB1Q12824 385 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 HTR4Q13639 388 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 IL17AQ16552 155 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 TMEM119Q4V9L6 283 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 GLRA4Q5JXX5 417 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 ARMCX5Q6P1M9 558 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 C1orf228Q6PIY5 440 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 GPBP1Q86WP2 473 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 METTL23Q86XA0 190 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 TCEAL8Q8IYN2 117 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 DAW1Q8N136 415 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 TMEM105Q8N8V8 129 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 NKD2Q969F2 451 aaPredicted RBP8.46□□□□□ -1.06
CD44-211ENST00000442151 PNMA5Q96PV4 448 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 PAAF1Q9BRP4 392 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 RUSC1Q9BVN2 902 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 BCO2Q9BYV7 579 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 CCSER1Q9C0I3 900 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 ZHX3Q9H4I2 956 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 CYP4F11Q9HBI6 524 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 ANKFY1Q9P2R3 1169 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 DSEQ9UL01 958 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.06
CD44-211ENST00000442151 MUC6Q6W4X9 2439 aa8.46□□□□□ -1.06
CD44-211ENST00000442151 PP2D1A8MPX8 630 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 F8W810 466 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 MAN2B1O00754 1011 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 ECI2O75521 394 aa8.45□□□□□ -1.06
CD44-211ENST00000442151 PIGRP01833 764 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms