RNA–Protein interactions for RNA: ENST00000440612.5

CGREF1-207, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 3

Gene CGREF1, Length 1,695 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-207ENST00000440612 A0A0U1RQF3 1178 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 PTGESO14684 152 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 CCDC175P0C221 793 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 CLCN1P35523 988 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 TRIM60Q495X7 471 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 LINC01599Q8WXQ3 324 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 JAKMIP2Q96AA8 810 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 VRTNQ9H8Y1 702 aa30.02■■■□□ 2.4
CGREF1-207ENST00000440612 POLR2BP30876 1174 aaKnown RBP30.01■■■□□ 2.4
CGREF1-207ENST00000440612 TLE2Q04725 743 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 ZNF699Q32M78 642 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 AGMOQ6ZNB7 445 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 TAF4BQ92750 862 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 ZFP42Q96MM3 310 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 TSPAN18Q96SJ8 248 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 IFIH1Q9BYX4 1025 aaKnown RBP30.01■■■□□ 2.4
CGREF1-207ENST00000440612 IMPG2Q9BZV3 1241 aa30.01■■■□□ 2.4
CGREF1-207ENST00000440612 PDCD11Q14690 1871 aaKnown RBP30.01■■■□□ 2.39
CGREF1-207ENST00000440612 KRT19P08727 400 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 ASPAP45381 313 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 CYP27A1Q02318 531 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 GFPT1Q06210 699 aaPredicted RBP30.01■■■□□ 2.39
CGREF1-207ENST00000440612 FMNL3Q8IVF7 1028 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 LPPQ93052 612 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 NIF3L1Q9GZT8 377 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 NENFQ9UMX5 172 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 CNTN6Q9UQ52 1028 aa30.01■■■□□ 2.39
CGREF1-207ENST00000440612 A0A087X0T9 212 aa30■■■□□ 2.39
CGREF1-207ENST00000440612 CYP26A1O43174 497 aa30■■■□□ 2.39
CGREF1-207ENST00000440612 FAM228BP0C875 321 aa30■■■□□ 2.39
CGREF1-207ENST00000440612 ITGA4P13612 1032 aa30■■■□□ 2.39
CGREF1-207ENST00000440612 TBXAS1P24557 533 aaPredicted RBP30■■■□□ 2.39
CGREF1-207ENST00000440612 AFF1P51825 1210 aaKnown RBP30■■■□□ 2.39
CGREF1-207ENST00000440612 ACP6Q9NPH0 428 aa30■■■□□ 2.39
CGREF1-207ENST00000440612 AGAP1Q9UPQ3 857 aa30■■■□□ 2.39
CGREF1-207ENST00000440612 PPEF2O14830 753 aa29.99■■■□□ 2.39
CGREF1-207ENST00000440612 TLR3O15455 904 aaKnown RBP29.99■■■□□ 2.39
CGREF1-207ENST00000440612 ZSCAN12O43309 604 aa29.99■■■□□ 2.39
CGREF1-207ENST00000440612 STAU1O95793 577 aaKnown RBP29.99■■■□□ 2.39
CGREF1-207ENST00000440612 ATICP31939 592 aa29.99■■■□□ 2.39
CGREF1-207ENST00000440612 RAB27AP51159 221 aa29.99■■■□□ 2.39
CGREF1-207ENST00000440612 SOX4Q06945 474 aaPredicted RBP29.99■■■□□ 2.39
CGREF1-207ENST00000440612 ZNF598Q86UK7 904 aaKnown RBP29.99■■■□□ 2.39
CGREF1-207ENST00000440612 PPP1R10Q96QC0 940 aaKnown RBP29.99■■■□□ 2.39
CGREF1-207ENST00000440612 RGS18Q9NS28 235 aa29.99■■■□□ 2.39
CGREF1-207ENST00000440612 ADAMTS1Q9UHI8 967 aa29.99■■■□□ 2.39
CGREF1-207ENST00000440612 UBQLN1Q9UMX0 589 aaKnown RBP29.99■■■□□ 2.39
CGREF1-207ENST00000440612 AKR1B10O60218 316 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 RBP5P82980 135 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 SLC18A3Q16572 532 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 NYAP1Q6ZVC0 841 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 SLC30A5Q8TAD4 765 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 EPS8L1Q8TE68 723 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 PAWRQ96IZ0 340 aaKnown RBP29.98■■■□□ 2.39
CGREF1-207ENST00000440612 DEF6Q9H4E7 631 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 NOCTQ9UK39 431 aaKnown RBP29.98■■■□□ 2.39
CGREF1-207ENST00000440612 POLIQ9UNA4 740 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 ANO9A1A5B4 782 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 ABL1P00519 1130 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 ANXA13P27216 316 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 ARHGAP25P42331 645 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 NAB2Q15742 525 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 SLC47A2Q86VL8 602 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 BEST2Q8NFU1 509 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 FAXDC2Q96IV6 333 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 WNT8AQ9H1J5 351 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 GIT1Q9Y2X7 761 aa29.98■■■□□ 2.39
CGREF1-207ENST00000440612 RCCD1A6NED2 376 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 C9IYK1 514 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 DDX3XO00571 662 aaKnown RBP eCLIP29.97■■■□□ 2.392e-11■■■□□ 18.1
CGREF1-207ENST00000440612 CCDC172P0C7W6 258 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 MLH1P40692 756 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 USP8P40818 1118 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 PLEKHG4Q58EX7 1191 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 NOP9Q86U38 636 aaKnown RBP29.97■■■□□ 2.39
CGREF1-207ENST00000440612 LNX1Q8TBB1 728 aaPredicted RBP29.97■■■□□ 2.39
CGREF1-207ENST00000440612 SLC20A1Q8WUM9 679 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 HPDLQ96IR7 371 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 GAD1Q99259 594 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 BCO2Q9BYV7 579 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 MIOSQ9NXC5 875 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 TBX21Q9UL17 535 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 TFR2Q9UP52 801 aa29.97■■■□□ 2.39
CGREF1-207ENST00000440612 DCDC2CA8MYV0 355 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 CCP110O43303 1012 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 CYP3A5P20815 502 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 FAM189BP81408 668 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 C9orf57Q5W0N0 161 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 ECHDC2Q86YB7 292 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 HIPK3Q9H422 1215 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 C11orf49Q9H6J7 331 aa29.96■■■□□ 2.39
CGREF1-207ENST00000440612 KIAA0100Q14667 2235 aaKnown RBP29.95■■■□□ 2.39
CGREF1-207ENST00000440612 PIRO00625 290 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 CHRNB2P17787 502 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 ZNF132P52740 706 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 KRT83P78385 493 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 TCTN1Q2MV58 587 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 WDR72Q3MJ13 1102 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 HACE1Q8IYU2 909 aa29.95■■■□□ 2.39
CGREF1-207ENST00000440612 DDX1Q92499 740 aaKnown RBP29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms