RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 ABL1P00519 1130 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 KRT19P08727 400 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 ITGA4P13612 1032 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 ITGB8P26012 769 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 AP3M2P53677 418 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 YARSP54577 528 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 POU5F1Q01860 360 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 CETN1Q12798 172 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 HSP90AA2PQ14568 343 aaPredicted RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 NAB2Q15742 525 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 KYAT1Q16773 422 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 ASTE1Q2TB18 679 aaPredicted RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 ZNF699Q32M78 642 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 TDRD12Q587J7 1177 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 ZNF571Q7Z3V5 609 aaPredicted RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 APBB1IPQ7Z5R6 666 aaPredicted RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 MRPL10Q7Z7H8 261 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 ZNF598Q86UK7 904 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 TMTC1Q8IUR5 882 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 REXO1L1PQ8IX06 675 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 CCAR2Q8N163 923 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 RNF169Q8NCN4 708 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 DBF4BQ8NFT6 615 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 LNX1Q8TBB1 728 aaPredicted RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 SHC3Q92529 594 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 PPP1R10Q96QC0 940 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 GAD1Q99259 594 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 SYT11Q9BT88 431 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 HIPK3Q9H422 1215 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 HAUS4Q9H6D7 363 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 SMYD3Q9H7B4 428 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 CHST12Q9NRB3 414 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 C1orf112Q9NSG2 853 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 AGAP1Q9UPQ3 857 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 ADGRG1Q9Y653 693 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 SQORQ9Y6N5 450 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 ZNF638Q14966 1978 aaKnown RBP9.55□□□□□ -0.88
SMC6-204ENST00000428868 PLXNA4Q9HCM2 1894 aa9.55□□□□□ -0.88
SMC6-204ENST00000428868 RCCD1A6NED2 376 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 C9IYK1 514 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PITPNM1O00562 1244 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 CYP26A1O43174 497 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 B4GALT3O60512 393 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 ZC3H11AO75152 810 aaKnown RBP eCLIP9.54□□□□□ -0.88
SMC6-204ENST00000428868 CLSTN1O94985 981 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 NDUFA10O95299 355 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 SERPING1P05155 500 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 KCNE1P15382 129 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 ZSCAN20P17040 1043 aaPredicted RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 EN2P19622 333 aaPredicted RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 RFX1P22670 979 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 MSNP26038 577 aaKnown RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 CLCN1P35523 988 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 USP8P40818 1118 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PRKCIP41743 596 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 STAT1P42224 750 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 ASPAP45381 313 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 GATMP50440 423 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 SCNN1GP51170 649 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 KIF11P52732 1056 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 CDH8P55286 799 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 CDK17Q00537 523 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 CYP27A1Q02318 531 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 GCNT1Q02742 428 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PTK2Q05397 1052 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 GFPT1Q06210 699 aaPredicted RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 KLHL30Q0D2K2 578 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 MAPK8IP2Q13387 824 aaPredicted RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 TRPC3Q13507 836 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 BFSP2Q13515 415 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 CUL2Q13617 745 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PLEKHG4Q58EX7 1191 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 C1orf53Q5VUE5 145 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 ECHDC2Q86YB7 292 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PALB2Q86YC2 1186 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 ANKLE1Q8NAG6 615 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 RABGGTAQ92696 567 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 SYN2Q92777 582 aaPredicted RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 PPP1R13BQ96KQ4 1090 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 SEZ6LQ9BYH1 1024 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PLEKHA5Q9HAU0 1116 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 HMGXB4Q9UGU5 601 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 MYO6Q9UM54 1294 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 PPP2R2CQ9Y2T4 447 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 DERAQ9Y315 318 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 NME7Q9Y5B8 376 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 EPN1Q9Y6I3 576 aaPredicted RBP9.54□□□□□ -0.88
SMC6-204ENST00000428868 ATG2AQ2TAZ0 1938 aa9.54□□□□□ -0.88
SMC6-204ENST00000428868 A0A087X0T9 212 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 A0A0U1RQF3 1178 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 TRIM43BA6NCK2 446 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 ARL5CA6NH57 179 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 DCDC2CA8MYV0 355 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 DDX3XO00571 662 aaKnown RBP eCLIP9.53□□□□□ -0.882e-8■■■■□ 24.4
SMC6-204ENST00000428868 SPTLC1O15269 473 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 HCRTO43612 131 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 ZNF623O75123 536 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 CFHP08603 1231 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 CLTBP09497 229 aa9.53□□□□□ -0.88
SMC6-204ENST00000428868 WEE2P0C1S8 567 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms