RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 C6orf203Q9P0P8 240 aaPredicted RBP5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 CHPF2Q9P2E5 772 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 IGSF9Q9P2J2 1179 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 AMACRQ9UHK6 382 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 SIK3Q9Y2K2 1263 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 COQ6Q9Y2Z9 468 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIM17Q9Y577 477 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 PCDHB6Q9Y5E3 794 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 KIDINS220Q9ULH0 1771 aa5.93□□□□□ -1.46
VTI1BP4-201ENST00000427516 ECM29Q5VYK3 1845 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RIMBP3CA6NJZ7 1639 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RIMBP3BA6NNM3 1639 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RIMBP3Q9UFD9 1639 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TIAM2Q8IVF5 1701 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 C15orf38-AP3S2A0A0A6YYH1 394 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 IQANK1A0A1B0GTG1 560 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF839A8K0R7 811 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 DCDC2CA8MYV0 355 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 H0YJX3 145 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RNF225M0QZC1 329 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 PFDN6O15212 129 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KMOO15229 486 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC22A1O15245 554 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 GSC2O15499 205 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 THAP12O43422 761 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 DENRO43583 198 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TBX10O75333 385 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 FARP2O94887 1054 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 A1BGP04217 495 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 PYGMP11217 842 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT13P13646 458 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT5P13647 590 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RFX1P22670 979 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 VARSP26640 1264 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCNFP41002 786 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 PHKA2P46019 1235 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TOB1P50616 345 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 GALK1P51570 392 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 BCAP31P51572 246 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 STAT2P52630 851 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 EIF4A1P60842 406 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ACTR3P61158 418 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ATP6V0D1P61421 351 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT76Q01546 638 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 PLOD1Q02809 727 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 GFPT1Q06210 699 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLRC3Q07444 240 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 IKQ13123 557 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 MOGSQ13724 837 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 NTRK3Q16288 839 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ARL13BQ3SXY8 428 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KHDC1Q4VXA5 237 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TAF1BQ53T94 588 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 C1orf146Q5VVC0 180 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 PTCRAQ6ISU1 281 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZFP1Q6P2D0 407 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TUBA3EQ6PEY2 450 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TTC23LQ6PF05 361 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLHL35Q6PF15 583 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KLHDC10Q6PID8 442 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC2A7Q6PXP3 512 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RBM44Q6ZP01 1051 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 LINC00299Q6ZSB3 139 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KRT26Q7Z3Y9 468 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ARPINQ7Z6K5 226 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLFN11Q7Z7L1 901 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TRIM50Q86XT4 487 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TDRPQ86YL5 185 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 IRF2BP1Q8IU81 584 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RELL1Q8IUW5 271 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 CCDC105Q8IYK2 499 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 LARGE2Q8N3Y3 721 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 GUF1Q8N442 669 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ANKRD42Q8N9B4 389 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SUPT20HQ8NEM7 779 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF420Q8TAQ5 688 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 RAB3IL1Q8TBN0 382 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 MGARPQ8TDB4 240 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 GIPC3Q8TF64 312 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 FAM172AQ8WUF8 416 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 KCNN1Q92952 543 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLCO2A1Q92959 643 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 NACC2Q96BF6 587 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ZNF775Q96BV0 537 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SLC7A6OSQ96CW6 309 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 CALML4Q96GE6 196 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 MED30Q96HR3 178 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 HES6Q96HZ4 224 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 NSMCE3Q96MG7 304 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 FERMT1Q9BQL6 677 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 MRPL1Q9BYD6 325 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 WWP1Q9H0M0 922 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 STN1Q9H668 368 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 TBC1D7Q9P0N9 293 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 CRNNQ9UBG3 495 aaPredicted RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 FETUBQ9UGM5 382 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 ASAP1Q9ULH1 1129 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 PA2G4Q9UQ80 394 aaKnown RBP5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 CHKBQ9Y259 395 aa5.92□□□□□ -1.46
VTI1BP4-201ENST00000427516 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms