RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CCDC186Q7Z3E2 898 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 HACE1Q8IYU2 909 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 EHBP1Q8NDI1 1231 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 ANP32BQ92688 251 aaKnown RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 CASD1Q96PB1 797 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 ERGIC2Q96RQ1 377 aa14.48□□□□□ -0.09
PRPF39-202ENST00000424478 TIMM13Q9Y5L4 95 aaPredicted RBP14.48□□□□□ -0.09
PRPF39-202ENST00000424478 MYO7AQ13402 2215 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 CD58P19256 250 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 SSTR3P32745 418 aaPredicted RBP14.47□□□□□ -0.09
PRPF39-202ENST00000424478 RABGGTBP53611 331 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 MYO9BQ13459 2157 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 WDR72Q3MJ13 1102 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 NOMO2Q5JPE7 1267 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 USP37Q86T82 979 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 TMEM173Q86WV6 379 aaPredicted RBP14.47□□□□□ -0.09
PRPF39-202ENST00000424478 RPUSD2Q8IZ73 545 aaKnown RBP14.47□□□□□ -0.09
PRPF39-202ENST00000424478 XYLT2Q9H1B5 865 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 PLEKHA5Q9HAU0 1116 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 C1orf112Q9NSG2 853 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 FNDC1Q4ZHG4 1894 aaPredicted RBP14.47□□□□□ -0.09
PRPF39-202ENST00000424478 MYOGP15173 224 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 NOP14P78316 857 aaKnown RBP14.47□□□□□ -0.09
PRPF39-202ENST00000424478 ZNF394Q53GI3 561 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 XKR4Q5GH76 650 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 NEK11Q8NG66 645 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 B3GALT6Q96L58 329 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 GANQ9H2C0 597 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 C2CD2Q9Y426 696 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 PRUNE2Q8WUY3 3088 aa14.47□□□□□ -0.09
PRPF39-202ENST00000424478 KCNE1P15382 129 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 RFC2P35250 354 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 USP8P40818 1118 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 PPIGQ13427 754 aaKnown RBP eCLIP14.46□□□□□ -0.093e-9■■■■□ 25.1
PRPF39-202ENST00000424478 ZNF699Q32M78 642 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 KLHDC7AQ5VTJ3 777 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 C9orf57Q5W0N0 161 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 KREMEN1Q96MU8 473 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 C5orf42Q9H799 3197 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 H0YGN5 161 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 EOMESO95936 686 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 UCHL3P15374 230 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 DEKP35659 375 aaKnown RBP14.46□□□□□ -0.09
PRPF39-202ENST00000424478 BRCC3P46736 316 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 OR1G1P47890 313 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 KCNJ6P48051 423 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 KYAT1Q16773 422 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 BEST2Q8NFU1 509 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 HPDLQ96IR7 371 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 SMYD3Q9H7B4 428 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 DNAJC12Q9UKB3 198 aa14.46□□□□□ -0.09
PRPF39-202ENST00000424478 UBQLN1Q9UMX0 589 aaKnown RBP14.46□□□□□ -0.09
PRPF39-202ENST00000424478 LCHNA4D1U4 455 aa14.46□□□□□ -0.1
PRPF39-202ENST00000424478 PARNO95453 639 aaKnown RBP14.46□□□□□ -0.1
PRPF39-202ENST00000424478 TOP1MTQ969P6 601 aa14.46□□□□□ -0.1
PRPF39-202ENST00000424478 MMS19Q96T76 1030 aa14.46□□□□□ -0.1
PRPF39-202ENST00000424478 SNX9Q9Y5X1 595 aa14.46□□□□□ -0.1
PRPF39-202ENST00000424478 TRANK1O15050 2925 aa14.46□□□□□ -0.1
PRPF39-202ENST00000424478 TRIOBPQ9H2D6 2365 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 ABHD14A-ACY1A0A1B0GW23 586 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 SHHQ15465 462 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 SURF1Q15526 300 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 CCDC142Q17RM4 750 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 CACTINQ8WUQ7 758 aaKnown RBP14.45□□□□□ -0.1
PRPF39-202ENST00000424478 LPIN3Q9BQK8 851 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 SDCBP2Q9H190 292 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 NRDE2Q9H7Z3 1164 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 COQ4Q9Y3A0 265 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 COL4A6Q14031 1691 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 UNC80Q8N2C7 3258 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 B3GAT3O94766 335 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 KIF4AO95239 1232 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 PTMAP06454 111 aaKnown RBP14.45□□□□□ -0.1
PRPF39-202ENST00000424478 CACNA2D4Q7Z3S7 1137 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 NPAS4Q8IUM7 802 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 TTYH3Q9C0H2 523 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 APEX2Q9UBZ4 518 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 HMGXB4Q9UGU5 601 aa14.45□□□□□ -0.1
PRPF39-202ENST00000424478 A0A1W2PQC6 194 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 LRRC53A6NM62 1247 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 PODXLO00592 558 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 STX10O60499 249 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 DGKIO75912 1065 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 ASS1P00966 412 aaKnown RBP14.44□□□□□ -0.1
PRPF39-202ENST00000424478 AMHP03971 560 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 SKIP12755 728 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 SKILP12757 684 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 CAPN2P17655 700 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 CETN1Q12798 172 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 ZBED2Q9BTP6 218 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 MTUS1Q9ULD2 1270 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 GTF2H1P32780 548 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 KRT9P35527 623 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 TBX2Q13207 712 aaPredicted RBP14.44□□□□□ -0.1
PRPF39-202ENST00000424478 SPOUT1Q5T280 376 aaKnown RBP14.44□□□□□ -0.1
PRPF39-202ENST00000424478 PPFIBP1Q86W92 1011 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 PDLIM2Q96JY6 352 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 NT5C1BQ96P26 610 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 YME1L1Q96TA2 773 aa14.44□□□□□ -0.1
PRPF39-202ENST00000424478 R3HCC1Q9Y3T6 440 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 643 ms