RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 LIN9Q5TKA1 542 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 SLC44A3Q8N4M1 653 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 ST13P5Q8NFI4 369 aaPredicted RBP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 ZNF461Q8TAF7 563 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 ITFG1Q8TB96 612 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 BICD1Q96G01 975 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 DNMT3BQ9UBC3 853 aaKnown RBP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 FBXL5Q9UKA1 691 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 CPSF3Q9UKF6 684 aaKnown RBP12.03□□□□□ -0.48
SSBP3-206ENST00000420121 STYXL1Q9Y6J8 313 aa12.03□□□□□ -0.48
SSBP3-206ENST00000420121 ARHGEF37A1IGU5 675 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 M0QZQ0 153 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 NRG2O14511 850 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-206ENST00000420121 STX6O43752 255 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 TBCAO75347 108 aaKnown RBP12.02□□□□□ -0.49
SSBP3-206ENST00000420121 SEC24AO95486 1093 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 VNN2O95498 520 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 KRT18P05783 430 aaKnown RBP12.02□□□□□ -0.49
SSBP3-206ENST00000420121 CYP3A5P20815 502 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 FSHRP23945 695 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 NASPP49321 788 aaPredicted RBP12.02□□□□□ -0.49
SSBP3-206ENST00000420121 RTL10Q7L3V2 364 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 DYMQ7RTS9 669 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 ZNF720Q7Z2F6 126 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 ALYREFQ86V81 257 aaKnown RBP12.02□□□□□ -0.49
SSBP3-206ENST00000420121 SFR1Q86XK3 245 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 RASSF8Q8NHQ8 419 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 DDX12PQ92771 950 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 FGF14Q92915 247 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 SNX21Q969T3 373 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 KIF12Q96FN5 646 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 RPP25Q9BUL9 199 aaKnown RBP12.02□□□□□ -0.49
SSBP3-206ENST00000420121 ZHX3Q9H4I2 956 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 NUB1Q9Y5A7 615 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 COL4A2P08572 1712 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 VPS13AQ96RL7 3174 aa12.02□□□□□ -0.49
SSBP3-206ENST00000420121 FRMD3A2A2Y4 597 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 KRBA1A5PL33 1030 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 PI15O43692 258 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 XYLBO75191 536 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 ATF2P15336 505 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 ADSSP30520 456 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 MCM4P33991 863 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 MATR3P43243 847 aaKnown RBP eCLIP12.01□□□□□ -0.49
SSBP3-206ENST00000420121 PTPN5P54829 565 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 PPP2R3AQ06190 1150 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 KCNA1Q09470 495 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 SLC5A9Q2M3M2 681 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 SPATA1Q5VX52 437 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 RRAGBQ5VZM2 374 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 ASTLQ6HA08 431 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-206ENST00000420121 PARM1Q6UWI2 310 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 CRELD2Q6UXH1 353 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-206ENST00000420121 TCEAL8Q8IYN2 117 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 LINC00301Q8NCQ3 95 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 BEST2Q8NFU1 509 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 FGF13Q92913 245 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 NXPE3Q969Y0 559 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 PRRX2Q99811 253 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 MSTO1Q9BUK6 570 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 FGFBP2Q9BYJ0 223 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 ZSCAN16Q9H4T2 348 aaPredicted RBP12.01□□□□□ -0.49
SSBP3-206ENST00000420121 CCDC39Q9UFE4 941 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 CDH7Q9ULB5 785 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 UBQLN1Q9UMX0 589 aaKnown RBP12.01□□□□□ -0.49
SSBP3-206ENST00000420121 PCDHB8Q9UN66 801 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 NUMBLQ9Y6R0 609 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 MIA3Q5JRA6 1907 aa12.01□□□□□ -0.49
SSBP3-206ENST00000420121 DENND4CQ5VZ89 1909 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 H7C4K7 107 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 SPTLC1O15269 473 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 OAZ2O95190 189 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 CFHP08603 1231 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 NFICP08651 508 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 SRFP11831 508 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 ACOT2P49753 483 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 MRE11P49959 708 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 CLCN5P51795 746 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 CASP5P51878 434 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 NUBP1P53384 320 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 WNT7BP56706 349 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 E2F4Q16254 413 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 KYAT1Q16773 422 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 CTXN3Q4LDR2 81 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 JADE1Q6IE81 842 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 NPAS3Q8IXF0 933 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 SIX5Q8N196 739 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 KRI1Q8N9T8 703 aaKnown RBP12□□□□□ -0.49
SSBP3-206ENST00000420121 ZSWIM2Q8NEG5 633 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 HVCN1Q96D96 273 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 TSPAN18Q96SJ8 248 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 RPF1Q9H9Y2 349 aaKnown RBP12□□□□□ -0.49
SSBP3-206ENST00000420121 AVENQ9NQS1 362 aaPredicted RBP12□□□□□ -0.49
SSBP3-206ENST00000420121 WNT16Q9UBV4 365 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 POLIQ9UNA4 740 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 TIMM13Q9Y5L4 95 aaPredicted RBP12□□□□□ -0.49
SSBP3-206ENST00000420121 INSL5Q9Y5Q6 135 aa12□□□□□ -0.49
SSBP3-206ENST00000420121 ZFP37Q9Y6Q3 630 aaPredicted RBP12□□□□□ -0.49
SSBP3-206ENST00000420121 ANO9A1A5B4 782 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms