RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 SLIT3O75094 1523 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PLSCR1O15162 318 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 BUD23O43709 281 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TRMUO75648 421 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TCEA3O75764 348 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CIAO1O76071 339 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 BAG2O95816 211 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CLPTM1O96005 669 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TFAP2AP05549 437 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 VCLP18206 1134 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 S100A1P23297 94 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PCSK6P29122 969 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ADORA1P30542 326 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 HOXA10P31260 410 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PGM1P36871 562 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TMED10P49755 219 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 FOXO4P98177 505 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SPARCL1Q14515 664 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PDK3Q15120 406 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PDK4Q16654 411 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 NADK2Q4G0N4 442 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SYCP2LQ5T4T6 812 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 FYB2Q5VWT5 728 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 UGT2A3Q6UWM9 527 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PACS1Q6VY07 963 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 LRRC55Q6ZSA7 311 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RFX8Q6ZV50 586 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RAPH1Q70E73 1250 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 NET1Q7Z628 596 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 LRRC6Q86X45 466 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SFR1Q86XK3 245 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ZFP28Q8NHY6 868 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ZCRB1Q8TBF4 217 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF398Q8TD17 642 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 HPS3Q969F9 1004 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ITPKCQ96DU7 683 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CYTH2Q99418 400 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TTC1Q99614 292 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TAS2R1Q9NYW7 299 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TBK1Q9UHD2 729 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PCYOX1Q9UHG3 505 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 LGALS13Q9UHV8 139 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ASAP1Q9ULH1 1129 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 NR2E3Q9Y5X4 410 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 NUMBLQ9Y6R0 609 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 A0A1W2PRG0 241 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RNMTO43148 476 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 MAGEC1O60732 1142 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 DKC1O60832 514 aaKnown RBP eCLIP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PTCD1O75127 700 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CDH16O75309 829 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 OXSR1O95747 527 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ZBED1O96006 694 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PCCAP05165 728 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 H2AFZP0C0S5 128 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PLCG1P19174 1290 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SLC5A2P31639 672 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CETN2P41208 172 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RXRGP48443 463 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TRPC1P48995 793 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RAB15P59190 212 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RPL26P61254 145 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PFKPQ01813 784 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PLCB3Q01970 1234 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 UBE3CQ15386 1083 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ALX1Q15699 326 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TXNRD1Q16881 649 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TRMT5Q32P41 509 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 MMEL1Q495T6 779 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ANKRD20A4Q4UJ75 823 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 MAP3K21Q5TCX8 1036 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 C6orf163Q5TEZ5 329 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF530Q6P9A1 599 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 H2AFVQ71UI9 128 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 OTOAQ7RTW8 1153 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 IRF2BP2Q7Z5L9 587 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 METTL25Q8N6Q8 603 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SYT2Q8N9I0 419 aaPredicted RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SPATA5Q8NB90 893 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 RIN3Q8TB24 985 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 GIPC3Q8TF64 312 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 U2AF1L4Q8WU68 220 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SREK1Q8WXA9 508 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CLIP3Q96DZ5 547 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 FAM161BQ96MY7 647 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 PPP1R10Q96QC0 940 aaKnown RBP6.76□□□□□ -1.33
CCNT1-202ENST00000417344 CCT7Q99832 543 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 LRRC27Q9C0I9 530 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 DRC3Q9H069 523 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TPK1Q9H3S4 243 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TRPC7Q9HCX4 862 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 NPHS2Q9NP85 383 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 SELENONQ9NZV5 590 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 ZNHIT2Q9UHR6 403 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 NAALADL1Q9UQQ1 740 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 TRIM17Q9Y577 477 aa6.76□□□□□ -1.33
CCNT1-202ENST00000417344 C15orf38-AP3S2A0A0A6YYH1 394 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 RASA4BC9J798 803 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms