RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 TMEM206Q9H813 350 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 MTRRQ9UBK8 725 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 CDY1Q9Y6F8 540 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 TSC2P49815 1807 aa16.09■□□□□ 0.17
LIMS4-201ENST00000413601 TULP1O00294 542 aaPredicted RBP16.08■□□□□ 0.16
LIMS4-201ENST00000413601 SLFN14P0C7P3 912 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 HOXD13P35453 343 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 TMEM132DQ14C87 1099 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 FAM26FQ5R3K3 315 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 VARS2Q5ST30 1063 aaKnown RBP16.08■□□□□ 0.16
LIMS4-201ENST00000413601 SPATA1Q5VX52 437 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 C15orf39Q6ZRI6 1047 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 UNC13DQ70J99 1090 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 BEST2Q8NFU1 509 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 CMASQ8NFW8 434 aaPredicted RBP16.08■□□□□ 0.16
LIMS4-201ENST00000413601 PAGE5Q96GU1 130 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 CBWD1Q9BRT8 395 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 PCIF1Q9H4Z3 704 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 ASB7Q9H672 318 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 GDPD2Q9HCC8 539 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 MUTYHQ9UIF7 546 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 HPSEQ9Y251 543 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 NR2E1Q9Y466 385 aa16.08■□□□□ 0.16
LIMS4-201ENST00000413601 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.08■□□□□ 0.16
LIMS4-201ENST00000413601 GOLGA8IPA6NC78 632 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 GOLGA8JA6NMD2 632 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 PPEF2O14830 753 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 SYN3O14994 580 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 DCXO43602 365 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 ALADP13716 330 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 GARTP22102 1010 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 EHHADHQ08426 723 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 RAB33AQ14088 237 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 EPM2AIP1Q7L775 607 aaPredicted RBP16.07■□□□□ 0.16
LIMS4-201ENST00000413601 NOC3LQ8WTT2 800 aaKnown RBP16.07■□□□□ 0.16
LIMS4-201ENST00000413601 C1QTNF1Q9BXJ1 281 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 FBXW11Q9UKB1 542 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 DERAQ9Y315 318 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 BACE2Q9Y5Z0 518 aa16.07■□□□□ 0.16
LIMS4-201ENST00000413601 DOCK8Q8NF50 2099 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 PVALEFA0A1B0GWK0 134 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 C2CD4DB7Z1M9 353 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 EIF3DO15371 548 aaKnown RBP eCLIP16.06■□□□□ 0.16
LIMS4-201ENST00000413601 ZMYND10O75800 440 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 IL18RAPO95256 599 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
LIMS4-201ENST00000413601 NDUFA8P51970 172 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 WNT7BP56706 349 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 NUCB2P80303 420 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 POU5F1Q01860 360 aaKnown RBP16.06■□□□□ 0.16
LIMS4-201ENST00000413601 MRPL58Q14197 206 aaKnown RBP16.06■□□□□ 0.16
LIMS4-201ENST00000413601 C9orf57Q5W0N0 161 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 ARMCX5Q6P1M9 558 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 ZNF507Q8TCN5 953 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 SMG7Q92540 1137 aaKnown RBP16.06■□□□□ 0.16
LIMS4-201ENST00000413601 ZNF707Q96C28 371 aaPredicted RBP16.06■□□□□ 0.16
LIMS4-201ENST00000413601 SLC39A2Q9NP94 309 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 ZDHHC7Q9NXF8 308 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 DPP3Q9NY33 737 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 USP25Q9UHP3 1055 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 C2CD2Q9Y426 696 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 NOTCH4Q99466 2003 aa16.06■□□□□ 0.16
LIMS4-201ENST00000413601 FAM86C2PA6NEL3 165 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 H7C4K7 107 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 M0QZQ0 153 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 EXTL3O43909 919 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 TBC1D4O60343 1298 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 SYKP43405 635 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 AARSP49588 968 aaKnown RBP eCLIP16.05■□□□□ 0.16
LIMS4-201ENST00000413601 ARPP19P56211 112 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 LILRA4P59901 499 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 CTXN3Q4LDR2 81 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 LIN9Q5TKA1 542 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 SLC8B1Q6J4K2 584 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 CCDC149Q6ZUS6 474 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 NELFCDQ8IXH7 590 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 EFCAB13Q8IY85 973 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 FSIP1Q8NA03 581 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 APPL2Q8NEU8 664 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 SCFD1Q8WVM8 642 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 PRKD2Q9BZL6 878 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 GOLPH3LQ9H4A5 285 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 PIDD1Q9HB75 910 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 C11orf16Q9NQ32 467 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 RBAKQ9NYW8 714 aaPredicted RBP16.05■□□□□ 0.16
LIMS4-201ENST00000413601 FBXL5Q9UKA1 691 aa16.05■□□□□ 0.16
LIMS4-201ENST00000413601 TIMM13Q9Y5L4 95 aaPredicted RBP16.05■□□□□ 0.16
LIMS4-201ENST00000413601 FAM237AA0A1B0GTK4 181 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 A0A1W2PQ27 194 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 A0A1W2PQ64 194 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 A0A1W2PQD8 194 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 ANO9A1A5B4 782 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 PIRO00625 290 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 TGFB1I1O43294 461 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 KLRC4O43908 158 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 PAPLNO95428 1278 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 C8AP07357 584 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 ROR1Q01973 937 aa16.04■□□□□ 0.16
LIMS4-201ENST00000413601 PPM1LQ5SGD2 360 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms