RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 KIF5BP33176 963 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 CYP2C18P33260 490 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 LIG3P49916 1009 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 PURAQ00577 322 aaKnown RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 GHRHRQ02643 423 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 PPIGQ13427 754 aaKnown RBP eCLIP6.01□□□□□ -1.455e-8■■■■■ 31.2
LINC00342-201ENST00000412393 CUL4AQ13619 759 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 NECTIN1Q15223 517 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 FAM47CQ5HY64 1035 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 FAM109BQ6ICB4 259 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 TMC6Q7Z403 805 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 TMTC2Q8N394 836 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 TMEM199Q8N511 208 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 SAMD3Q8N6K7 520 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 CTCFLQ8NI51 663 aaPredicted RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 PIBF1Q8WXW3 757 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 VWCEQ96DN2 955 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 RNPC3Q96LT9 517 aaKnown RBP6.01□□□□□ -1.45
LINC00342-201ENST00000412393 MAP3K14Q99558 947 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 MTA3Q9BTC8 594 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 MYL10Q9BUA6 226 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 HDAC8Q9BY41 377 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 TRPV6Q9H1D0 765 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 MTMR10Q9NXD2 777 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 TCFL5Q9UL49 500 aa6.01□□□□□ -1.45
LINC00342-201ENST00000412393 SZT2Q5T011 3432 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 HSFX4A0A1B0GTS1 333 aaPredicted RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 HSFX3A0A1B0GWH4 333 aaPredicted RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 EIF3JO75822 258 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 PLEKHA8P1O95397 391 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 CALM1P0DP23 149 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 CALM2P0DP24 149 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 CALM3P0DP25 149 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 CSF2RAP15509 400 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 RXRAP19793 462 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 SMARCA1P28370 1054 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 CCND2P30279 289 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 LIFRP42702 1097 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 GNAQP50148 359 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 CHMP4BP1P59074 171 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 ANAPC15P60006 121 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 RNF4P78317 190 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 SMAD3P84022 425 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 ARHGAP1Q07960 439 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 TARBP2Q15633 366 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 LY6KQ17RY6 165 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 TMEM240Q5SV17 173 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 C16orf59Q7L2K0 433 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 TMEM87AQ8NBN3 555 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 AFG1LQ8WV93 481 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 RRP36Q96EU6 259 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 FCRL2Q96LA5 508 aaPredicted RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 FAM161BQ96MY7 647 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 NEK1Q96PY6 1258 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 BUD13Q9BRD0 619 aaKnown RBP eCLIP6□□□□□ -1.45
LINC00342-201ENST00000412393 LZTS2Q9BRK4 669 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 PDCD2LQ9BRP1 358 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 NOC4LQ9BVI4 516 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 SPZ1Q9BXG8 430 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 LRRC2Q9BYS8 371 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 ALDH8A1Q9H2A2 487 aaPredicted RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 HIPK3Q9H422 1215 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 IL23AQ9NPF7 189 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 TRMT13Q9NUP7 481 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 SEC63Q9UGP8 760 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 DDX41Q9UJV9 622 aaKnown RBP6□□□□□ -1.45
LINC00342-201ENST00000412393 MRVI1Q9Y6F6 885 aa6□□□□□ -1.45
LINC00342-201ENST00000412393 UMODL1Q5DID0 1318 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 UQCRHLA0A096LP55 91 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 TMEM82A0PJX8 343 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 FGBP02675 491 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 UQCRHP07919 91 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 MMP3P08254 477 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 SUPT20HL2P0C7V6 817 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 ACRP10323 421 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 CYP2C9P11712 490 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 CASTP20810 708 aaKnown RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 IGFBP6P24592 240 aaPredicted RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 CCL23P55773 120 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 NR1I3Q14994 352 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 PGM5Q15124 567 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 NFRKBQ6P4R8 1299 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 PSRC1Q6PGN9 363 aaPredicted RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 KCNV1Q6PIU1 500 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 SYNE3Q6ZMZ3 975 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 ZNF365Q70YC5 407 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 RAB11FIP4Q86YS3 637 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 DHX37Q8IY37 1157 aaKnown RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 RPUSD2Q8IZ73 545 aaKnown RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 PDCL2Q8N4E4 241 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 SRBD1Q8N5C6 995 aaKnown RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 IL31RAQ8NI17 732 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 CUL5Q93034 780 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 SYAP1Q96A49 352 aaPredicted RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 EAF1Q96JC9 268 aaPredicted RBP5.99□□□□□ -1.45
LINC00342-201ENST00000412393 SORCS2Q96PQ0 1159 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 WNT8AQ9H1J5 351 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 STXBP5LQ9Y2K9 1186 aa5.99□□□□□ -1.45
LINC00342-201ENST00000412393 ZDHHC9Q9Y397 364 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms