RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 AARSP49588 968 aaKnown RBP eCLIP20.71■□□□□ 0.91
SF3A1-202ENST00000411423 NTHL1P78549 312 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 ROR1Q01973 937 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 ATL3Q6DD88 541 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 SLFN12LQ6IEE8 588 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 SLC8B1Q6J4K2 584 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 EFCAB13Q8IY85 973 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 GRAMD1CQ8IYS0 662 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 POMGNT1Q8WZA1 660 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 SAAL1Q96ER3 474 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 FAM84AQ96KN4 292 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 ACCSQ96QU6 501 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 MYADMQ96S97 322 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 CBWD1Q9BRT8 395 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 DPP7Q9UHL4 492 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 FBXL5Q9UKA1 691 aa20.71■□□□□ 0.91
SF3A1-202ENST00000411423 TIMM13Q9Y5L4 95 aaPredicted RBP20.71■□□□□ 0.91
SF3A1-202ENST00000411423 WDR27A2RRH5 827 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 SPTLC1O15269 473 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 CNNM4Q6P4Q7 775 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 TRIM67Q6ZTA4 783 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 CCDC65Q8IXS2 484 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 IQUBQ8NA54 791 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 SLC7A14Q8TBB6 771 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 ASIC4Q96FT7 647 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 C7orf25Q9BPX7 421 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 BLZF1Q9H2G9 400 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 CUEDC2Q9H467 287 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 PCDHB8Q9UN66 801 aa20.7■□□□□ 0.9
SF3A1-202ENST00000411423 M0QZQ0 153 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 CCL16O15467 120 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 EHHADHQ08426 723 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 CYP26C1Q6V0L0 522 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 GRASPQ7Z6J2 395 aaPredicted RBP20.69■□□□□ 0.9
SF3A1-202ENST00000411423 LEO1Q8WVC0 666 aaPredicted RBP20.69■□□□□ 0.9
SF3A1-202ENST00000411423 FAM213AQ9BRX8 229 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 CFAP45Q9UL16 551 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 PCDHB13Q9Y5F0 798 aa20.69■□□□□ 0.9
SF3A1-202ENST00000411423 MYO10Q9HD67 2058 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ANO9A1A5B4 782 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 GOLGA8IPA6NC78 632 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 TMEM221A6NGB7 291 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 GOLGA8JA6NMD2 632 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 M0R296 226 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 PIRO00625 290 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ABLIM3O94929 683 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 SEC24AO95486 1093 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ARPP19P56211 112 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ASIC1P78348 528 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 CUL4BQ13620 913 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 TMEM132DQ14C87 1099 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 PPM1LQ5SGD2 360 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 C9orf57Q5W0N0 161 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ELMSAN1Q6PJG2 1045 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 EPM2AIP1Q7L775 607 aaPredicted RBP20.68■□□□□ 0.9
SF3A1-202ENST00000411423 CD302Q8IX05 232 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 ST13P5Q8NFI4 369 aaPredicted RBP20.68■□□□□ 0.9
SF3A1-202ENST00000411423 PCIF1Q9H4Z3 704 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 PIDD1Q9HB75 910 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 HCFC1R1Q9NWW0 138 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 SERTAD1Q9UHV2 236 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 NOTCH4Q99466 2003 aa20.68■□□□□ 0.9
SF3A1-202ENST00000411423 TSC2P49815 1807 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 DOCK8Q8NF50 2099 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 ACTN4O43707 911 aaKnown RBP20.67■□□□□ 0.9
SF3A1-202ENST00000411423 VNN2O95498 520 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 SIGLEC14Q08ET2 396 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 CTXN3Q4LDR2 81 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 LIN9Q5TKA1 542 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 OTOP3Q7RTS5 596 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 PLCD3Q8N3E9 789 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 BEST2Q8NFU1 509 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 RSAD2Q8WXG1 361 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 ASB7Q9H672 318 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 FAM13BQ9NYF5 915 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 KCNH3Q9ULD8 1083 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 EXOC7Q9UPT5 735 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 DERAQ9Y315 318 aa20.67■□□□□ 0.9
SF3A1-202ENST00000411423 SCN1AP35498 2009 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 A0A1B0GVL5 298 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 PDGFBP01127 241 aaPredicted RBP20.66■□□□□ 0.9
SF3A1-202ENST00000411423 HNRNPA1P09651 372 aaKnown RBP eCLIP20.66■□□□□ 0.9
SF3A1-202ENST00000411423 OR4Q2P0C623 313 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 GARTP22102 1010 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 HOXA9P31269 272 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 AFMP43652 599 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 LILRA4P59901 499 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 ALCAMQ13740 583 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 POSTNQ15063 836 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 POTEHQ6S545 545 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 GET4Q7L5D6 327 aaPredicted RBP20.66■□□□□ 0.9
SF3A1-202ENST00000411423 BRSK2Q8IWQ3 736 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 SYCP3Q8IZU3 236 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 ZNF461Q8TAF7 563 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 ACSF2Q96CM8 615 aaPredicted RBP20.66■□□□□ 0.9
SF3A1-202ENST00000411423 TSPAN18Q96SJ8 248 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 DNMT3BQ9UBC3 853 aaKnown RBP20.66■□□□□ 0.9
SF3A1-202ENST00000411423 SORCS3Q9UPU3 1222 aa20.66■□□□□ 0.9
SF3A1-202ENST00000411423 HPSEQ9Y251 543 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms