RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 AP3M2P53677 418 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 WDR5P61964 334 aaKnown RBP13.54□□□□□ -0.24
PMS1-204ENST00000409823 NOP14P78316 857 aaKnown RBP13.54□□□□□ -0.24
PMS1-204ENST00000409823 POU5F1Q01860 360 aaKnown RBP13.54□□□□□ -0.24
PMS1-204ENST00000409823 TBX2Q13207 712 aaPredicted RBP13.54□□□□□ -0.24
PMS1-204ENST00000409823 NAB2Q15742 525 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 ZNF699Q32M78 642 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 WDR44Q5JSH3 913 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 TTYH3Q9C0H2 523 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 XYLT2Q9H1B5 865 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 GANQ9H2C0 597 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.54□□□□□ -0.246e-6■■□□□ 13.3
PMS1-204ENST00000409823 ITIH6Q6UXX5 1313 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 TBKBP1A7MCY6 615 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 DDHD2O94830 711 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 ENPEPQ07075 957 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 NOMO2Q5JPE7 1267 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 C9orf57Q5W0N0 161 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 CRIPAKQ8N1N5 446 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 HPDLQ96IR7 371 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 TBC1D13Q9NVG8 400 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 DNAJB4Q9UDY4 337 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 DNAJC12Q9UKB3 198 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 POLIQ9UNA4 740 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 TTC3P53804 2025 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 ABHD14A-ACY1A0A1B0GW23 586 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 FAM170AA1A519 330 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 FGBP02675 491 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 KRT9P35527 623 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.242e-6■■□□□ 12.6
PMS1-204ENST00000409823 NT5C1BQ96P26 610 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 LBHD1Q9BQE6 289 aaPredicted RBP13.54□□□□□ -0.24
PMS1-204ENST00000409823 UBN1Q9NPG3 1134 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 ITGA11Q9UKX5 1188 aa13.54□□□□□ -0.24
PMS1-204ENST00000409823 LUC7L2Q9Y383 392 aaKnown RBP13.54□□□□□ -0.24
PMS1-204ENST00000409823 ASS1P00966 412 aaKnown RBP13.53□□□□□ -0.24
PMS1-204ENST00000409823 WEE2P0C1S8 567 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 USP8P40818 1118 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 RAP1GAPP47736 663 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 CDR1P51861 262 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 RBP5P82980 135 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 C3orf58Q8NDZ4 430 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 CASD1Q96PB1 797 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 PPP1R9BQ96SB3 815 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 DERAQ9Y315 318 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 XIRP2A4UGR9 3374 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 LRRC53A6NM62 1247 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 SPTLC1O15269 473 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 PMM2O15305 246 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 ZC3H11AO75152 810 aaKnown RBP eCLIP13.53□□□□□ -0.24
PMS1-204ENST00000409823 CD58P19256 250 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 CDH8P55286 799 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 SGSM1Q2NKQ1 1148 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 TMEM240Q5SV17 173 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 E4F1Q66K89 784 aaPredicted RBP13.53□□□□□ -0.24
PMS1-204ENST00000409823 NT5DC4Q86YG4 428 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 TC2NQ8N9U0 490 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 KREMEN1Q96MU8 473 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 SPAG5Q96R06 1193 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 MMS19Q96T76 1030 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 ACP6Q9NPH0 428 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 PLCB1Q9NQ66 1216 aa13.53□□□□□ -0.24
PMS1-204ENST00000409823 AKR1B15C9JRZ8 316 aaPredicted RBP13.52□□□□□ -0.24
PMS1-204ENST00000409823 I3L4J1 428 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 MFAP3LO75121 409 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 CALCAP01258 141 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 ITGB1P05556 798 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 KCNJ6P48051 423 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 NPAS4Q8IUM7 802 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 CCDC150Q8NCX0 1101 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 URGCPQ8TCY9 931 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 BAP1Q92560 729 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 TOP1MTQ969P6 601 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 ELAC1Q9H777 363 aaKnown RBP13.52□□□□□ -0.24
PMS1-204ENST00000409823 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 CAPN11Q9UMQ6 739 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 PRG3Q9Y2Y8 225 aaPredicted RBP13.52□□□□□ -0.24
PMS1-204ENST00000409823 SNX9Q9Y5X1 595 aa13.52□□□□□ -0.24
PMS1-204ENST00000409823 NT5C1B-RDH14C9J2C7 533 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 CAPN15O75808 1086 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 B3GAT3O94766 335 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 AMHP03971 560 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 TPM1P09493 284 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 GRIK3Q13003 919 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 DRAP1Q14919 205 aaPredicted RBP13.52□□□□□ -0.25
PMS1-204ENST00000409823 NUP58Q9BVL2 599 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 CEP72Q9P209 647 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 MICAL3Q7RTP6 2002 aa13.52□□□□□ -0.25
PMS1-204ENST00000409823 FOXN3O00409 490 aaPredicted RBP13.51□□□□□ -0.25
PMS1-204ENST00000409823 PODXLO00592 558 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 PIRO00625 290 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 XPOTO43592 962 aaKnown RBP13.51□□□□□ -0.25
PMS1-204ENST00000409823 PFKMP08237 780 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 SCN1AP35498 2009 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 OR1G1P47890 313 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 ORC1Q13415 861 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 ZNF394Q53GI3 561 aa13.51□□□□□ -0.25
PMS1-204ENST00000409823 FAM193BQ96PV7 902 aaPredicted RBP13.51□□□□□ -0.25
PMS1-204ENST00000409823 NAA15Q9BXJ9 866 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms