RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 ANO9A1A5B4 782 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 CASTOR2A6NHX0 329 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 H0YGN5 161 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 PODXLO00592 558 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 TLL1O43897 1013 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 CAPN15O75808 1086 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 VNN1O95497 513 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 ASS1P00966 412 aaKnown RBP16.43■□□□□ 0.22
AP1S3-204ENST00000409375 TAF6P49848 677 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 DSC1Q08554 894 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 PAN2Q504Q3 1202 aaKnown RBP16.43■□□□□ 0.22
AP1S3-204ENST00000409375 ZNF667Q5HYK9 610 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 SPOUT1Q5T280 376 aaKnown RBP16.43■□□□□ 0.22
AP1S3-204ENST00000409375 SPECC1LQ69YQ0 1117 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 TRIM65Q6PJ69 517 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 DCLRE1AQ6PJP8 1040 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 VSTM4Q8IW00 320 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 HPDLQ96IR7 371 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 PDLIM2Q96JY6 352 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 RAD9AQ99638 391 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 COLEC11Q9BWP8 271 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 LSM14BQ9BX40 385 aaKnown RBP16.43■□□□□ 0.22
AP1S3-204ENST00000409375 CXCL16Q9H2A7 254 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 VRTNQ9H8Y1 702 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 CXXC1Q9P0U4 656 aaPredicted RBP16.43■□□□□ 0.22
AP1S3-204ENST00000409375 NUB1Q9Y5A7 615 aa16.43■□□□□ 0.22
AP1S3-204ENST00000409375 PIRO00625 290 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 ALDH2P05091 517 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 LAG3P18627 525 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 TBXAS1P24557 533 aaPredicted RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 PON1P27169 355 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 BMP8BP34820 402 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 OR1G1P47890 313 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 ALDH7A1P49419 539 aaKnown RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 GATMP50440 423 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 AFF1P51825 1210 aaKnown RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 GUCY2FP51841 1108 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 MYL6P60660 151 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 YWHAEP62258 255 aaKnown RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 TNNC1P63316 161 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 NOP14P78316 857 aaKnown RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 HTRA4P83105 476 aaPredicted RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 MLLT1Q03111 559 aaPredicted RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 SOX4Q06945 474 aaPredicted RBP16.42■□□□□ 0.22
AP1S3-204ENST00000409375 SMYD5Q6GMV2 418 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 ENOSF1Q7L5Y1 443 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 FMNL3Q8IVF7 1028 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 COLGALT2Q8IYK4 626 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 FIBCD1Q8N539 461 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 GOLGA2P5Q9HBQ8 144 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 SIX4Q9UIU6 781 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 FAN1Q9Y2M0 1017 aa16.42■□□□□ 0.22
AP1S3-204ENST00000409375 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 RBAK-RBAKDNI3L0D1 243 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 B3GAT3O94766 335 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 DDHD2O94830 711 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 CST3P01034 146 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-204ENST00000409375 SLC9A1P19634 815 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 PBX1P40424 430 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 CLCNKBP51801 687 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 KCNMA1Q12791 1236 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 SHHQ15465 462 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 UPP1Q16831 310 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 WDR72Q3MJ13 1102 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 FIGNQ5HY92 759 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 CACNA2D4Q7Z3S7 1137 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 PPFIBP1Q86W92 1011 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 ZNF280BQ86YH2 543 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 TTC39CQ8N584 583 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-204ENST00000409375 LMO3Q8TAP4 145 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 EDEM3Q9BZQ6 932 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 DNAI2Q9GZS0 605 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 NIF3L1Q9GZT8 377 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 FAM124BQ9H5Z6 455 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-204ENST00000409375 NRDE2Q9H7Z3 1164 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 RC3H2Q9HBD1 1191 aaKnown RBP16.41■□□□□ 0.22
AP1S3-204ENST00000409375 FAM207AQ9NSI2 230 aaPredicted RBP16.41■□□□□ 0.22
AP1S3-204ENST00000409375 PCDH10Q9P2E7 1040 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 FBXL5Q9UKA1 691 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 RWDD3Q9Y3V2 267 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 PTPRSQ13332 1948 aa16.41■□□□□ 0.22
AP1S3-204ENST00000409375 COL4A6Q14031 1691 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 MFAP3P55082 362 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 GCNT1Q02742 428 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 LRMPQ12912 555 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 ELAVL2Q12926 359 aaKnown RBP16.4■□□□□ 0.22
AP1S3-204ENST00000409375 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 TMC6Q7Z403 805 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 PPM1KQ8N3J5 372 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 CXorf38Q8TB03 319 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 SEMA4DQ92854 862 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 JAKMIP2Q96AA8 810 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 FAM84AQ96KN4 292 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 ZNF558Q96NG5 402 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 XYLT2Q9H1B5 865 aa16.4■□□□□ 0.22
AP1S3-204ENST00000409375 CEP72Q9P209 647 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms