RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 SUSD3Q96L08 255 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 PYM1Q9BRP8 204 aaKnown RBP19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 SCAND2PQ9GZW5 306 aaPredicted RBP19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 PLEKHA4Q9H4M7 779 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 FBXW11Q9UKB1 542 aa19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 TIMM13Q9Y5L4 95 aaPredicted RBP19.71■□□□□ 0.75
PTPRN2-204ENST00000404321 C2CD4DB7Z1M9 353 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 CYP3A5P20815 502 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 HOXD13P35453 343 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 NDUFA8P51970 172 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 WNT7BP56706 349 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 SMG7Q92540 1137 aaKnown RBP19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 ZNF707Q96C28 371 aaPredicted RBP19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 FAM84AQ96KN4 292 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 SLC39A2Q9NP94 309 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 HPSEQ9Y251 543 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 BACE2Q9Y5Z0 518 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 TRIP11Q15643 1979 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 SYN3O14994 580 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 GARTP22102 1010 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 SYKP43405 635 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 RAB33AQ14088 237 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 LIN9Q5TKA1 542 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 DSTYKQ6XUX3 929 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 C15orf39Q6ZRI6 1047 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 EPM2AIP1Q7L775 607 aaPredicted RBP19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 EFCAB13Q8IY85 973 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 FSIP1Q8NA03 581 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 CMASQ8NFW8 434 aaPredicted RBP19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 GOLPH3LQ9H4A5 285 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 ASB7Q9H672 318 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 PIDD1Q9HB75 910 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 RBAKQ9NYW8 714 aaPredicted RBP19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 PCDHB8Q9UN66 801 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 NR2E1Q9Y466 385 aa19.7■□□□□ 0.74
PTPRN2-204ENST00000404321 ZMYND10O75800 440 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 C8AP07357 584 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 ALADP13716 330 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 EHHADHQ08426 723 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 CTXN3Q4LDR2 81 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 C9orf57Q5W0N0 161 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 CCDC149Q6ZUS6 474 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 SLC7A14Q8TBB6 771 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 HDAC7Q8WUI4 952 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 SCFD1Q8WVM8 642 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 C1QTNF1Q9BXJ1 281 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 FBXL5Q9UKA1 691 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 DERAQ9Y315 318 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 PLXNA3P51805 1871 aa19.69■□□□□ 0.74
PTPRN2-204ENST00000404321 CITO14578 2027 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 PVALEFA0A1B0GWK0 134 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 SPTLC1O15269 473 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 EIF3DO15371 548 aaKnown RBP eCLIP19.68■□□□□ 0.741e-7■■■■□ 26
PTPRN2-204ENST00000404321 EXTL3O43909 919 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 NUCB2P80303 420 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 TFAMQ00059 246 aaKnown RBP19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 ROR1Q01973 937 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 PPM1LQ5SGD2 360 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 BRSK2Q8IWQ3 736 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 TDRD5Q8NAT2 981 aaKnown RBP19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 APPL2Q8NEU8 664 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 ZNF507Q8TCN5 953 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 TSPAN18Q96SJ8 248 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 PRKD2Q9BZL6 878 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 C11orf16Q9NQ32 467 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 ZDHHC7Q9NXF8 308 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 DPP3Q9NY33 737 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 C2CD2Q9Y426 696 aa19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.68■□□□□ 0.74
PTPRN2-204ENST00000404321 H7C4K7 107 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 CCL16O15467 120 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 KLRC4O43908 158 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 IL18RAPO95256 599 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 C1RP00736 705 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 MRPL58Q14197 206 aaKnown RBP19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 SLC8B1Q6J4K2 584 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 GPD1LQ8N335 351 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 PDE11AQ9HCR9 933 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 EXOC1Q9NV70 894 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 LIMD1Q9UGP4 676 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 POLIQ9UNA4 740 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 VWA8A3KMH1 1905 aa19.67■□□□□ 0.74
PTPRN2-204ENST00000404321 A0A1W2PQ27 194 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 A0A1W2PQ64 194 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 A0A1W2PQD8 194 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 WDR27A2RRH5 827 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 M0QZQ0 153 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 PIRO00625 290 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 CLIC2O15247 247 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 TGFB1I1O43294 461 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 TBC1D4O60343 1298 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 LDHAP00338 332 aaKnown RBP19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 PRR29P0C7W0 189 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 AARSP49588 968 aaKnown RBP eCLIP19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 CYP2J2P51589 502 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 LILRA4P59901 499 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 NTHL1P78549 312 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 YWHAHQ04917 246 aaPredicted RBP19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 KMT5BQ4FZB7 885 aa19.66■□□□□ 0.74
PTPRN2-204ENST00000404321 TMEM31Q5JXX7 168 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms