RNA–Protein interactions for RNA: ENST00000397998.7

CSGALNACT1-202, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 3,962 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-202ENST00000397998 SIX2Q9NPC8 291 aa11.75□□□□□ -0.53
CSGALNACT1-202ENST00000397998 FBXO28Q9NVF7 368 aa11.75□□□□□ -0.53
CSGALNACT1-202ENST00000397998 USP21Q9UK80 565 aa11.75□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 WDR64B1ANS9 1081 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 H0YIN7 160 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ECHS1P30084 290 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ECE1P42892 770 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CENPCQ03188 943 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PPATQ06203 517 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 NFX1Q12986 1120 aaKnown RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MAP7Q14244 749 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PSMD6Q15008 389 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZDHHC24Q6UX98 284 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CPNE8Q86YQ8 564 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 TMEM35BQ8NCS4 154 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ETNPPLQ8TBG4 499 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 FAF2Q96CS3 445 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RMDN2Q96LZ7 410 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZNF317Q96PQ6 595 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RMDN3Q96TC7 470 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 IFT122Q9HBG6 1241 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 VCX3AQ9NNX9 186 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 GABBR1Q9UBS5 961 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 G3BP2Q9UN86 482 aaKnown RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CHMP2BQ9UQN3 213 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 STXBP5LQ9Y2K9 1186 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 DUOX1Q9NRD9 1551 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 B2RBV5 119 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 KRT37O76014 449 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PDE1BQ01064 536 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MTFR1Q15390 333 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CDO1Q16878 200 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ENOSF1Q7L5Y1 443 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PIGWQ7Z7B1 504 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CRLF3Q8IUI8 442 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RIBC1Q8N443 379 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MAGEC3Q8TD91 643 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 KCNH7Q9NS40 1196 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZDHHC18Q9NUE0 388 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 GRHL1Q9NZI5 618 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 N4BP2Q86UW6 1770 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 H0YCG3 227 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ENTPD5O75356 428 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 GNAT1P11488 350 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CALB2P22676 271 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SERPINB4P48594 390 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 JAM2P57087 298 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 THOC5Q13769 683 aaKnown RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SHROOM1Q2M3G4 852 aaPredicted RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SMTNL2Q2TAL5 461 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 WLSQ5T9L3 541 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RC3H1Q5TC82 1133 aaKnown RBP11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MCEEQ96PE7 176 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RNPEPL1Q9HAU8 725 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CYP4F11Q9HBI6 524 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PARVAQ9NVD7 372 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SLC9A2Q9UBY0 812 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MYH6P13533 1939 aa11.74□□□□□ -0.53
CSGALNACT1-202ENST00000397998 CNTNAP4Q9C0A0 1308 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZSCAN5DPP0CG00 497 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 VHLP40337 213 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PSMC5P62195 406 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 FAM160B2Q86V87 743 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 TRIM42Q8IWZ5 723 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 LARGE2Q8N3Y3 721 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 STK32AQ8WU08 396 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 THTPAQ9BU02 230 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 KIAA1683Q9H0B3 1180 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 DCLRE1BQ9H816 532 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MANSC1Q9H8J5 431 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 NDE1Q9NXR1 346 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZHX2Q9Y6X8 837 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 NWD2Q9ULI1 1742 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 DCCP43146 1447 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 H3BRJ5 948 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 GJB6O95452 261 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 NCF2P19878 526 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 EAPPQ56P03 285 aaPredicted RBP11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SV2AQ7L0J3 742 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ACER1Q8TDN7 264 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SLC7A3Q8WY07 619 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PCDHB18PQ96TA0 734 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 TBC1D10AQ9BXI6 508 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 MOV10L1Q9BXT6 1211 aaKnown RBP11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZNF341Q9BYN7 854 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SUGT1Q9Y2Z0 365 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PCDHA2Q9Y5H9 948 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RGPD5Q99666 1765 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 HLA-DRAP01903 254 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ZCCHC18P0CG32 403 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 IL1R1P14778 569 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RIPK1Q13546 671 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 ATG16L1Q676U5 607 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 PODNQ7Z5L7 613 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 RCOR2Q8IZ40 523 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 NSL1Q96IY1 281 aa11.73□□□□□ -0.53
CSGALNACT1-202ENST00000397998 FAM84AQ96KN4 292 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms