RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 MAFBQ9Y5Q3 323 aaPredicted RBP12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ADM5C9JUS6 153 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 ADCY3O60266 1144 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 RIOX2Q8IUF8 465 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 FAM118BQ9BPY3 351 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 MTMR12Q9C0I1 747 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 RNF181Q9P0P0 153 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 IP6K2Q9UHH9 426 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 AKT3Q9Y243 479 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 GINS2Q9Y248 185 aa12.3□□□□□ -0.44
PDXDC1-202ENST00000396410 USP2O75604 605 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 CALB1P05937 261 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 TXNP10599 105 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 POLR2BP30876 1174 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 TTC31Q49AM3 519 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 EAPPQ56P03 285 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 KCNV1Q6PIU1 500 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 CDR2LQ86X02 465 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 TRIM50Q86XT4 487 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 ECM2O94769 699 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 IFNB1P01574 187 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 CAPSQ13938 189 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 PTGISQ16647 500 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 CPNE8Q86YQ8 564 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 EFCAB13Q8IY85 973 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 ABRAQ8N0Z2 381 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 BBOF1Q8ND07 529 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 MGARPQ8TDB4 240 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 PIK3R5Q8WYR1 880 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 SNF8Q96H20 258 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 SHOX2O60902 331 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 TOM1L1O75674 476 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 RALAP11233 206 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 ZBTB41Q5SVQ8 909 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 DLK2Q6UY11 383 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.29□□□□□ -0.443e-6■□□□□ 8.5
PDXDC1-202ENST00000396410 ZNF516Q92618 1163 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 NSRP1Q9H0G5 558 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 DHX33Q9H6R0 707 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 PCYOX1Q9UHG3 505 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 CLEC11AQ9Y240 323 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 IVNS1ABPQ9Y6Y0 642 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 PI4K2BG5E9Z4 385 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 FARP2O94887 1054 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 SLC25A27O95847 323 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 WEE2P0C1S8 567 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 TGFB3P10600 412 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 IFT88Q13099 833 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 UAP1Q16222 522 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 SGSM1Q2NKQ1 1148 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 LBX2Q6XYB7 198 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 ANKS4BQ8N8V4 417 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 OR5B17Q8NGF7 314 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 ATL2Q8NHH9 583 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 CCT8L2Q96SF2 557 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 INTS9Q9NV88 658 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 BTBD7Q9P203 1132 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 LCMT1Q9UIC8 334 aa12.29□□□□□ -0.44
PDXDC1-202ENST00000396410 TCRBV7S2A1N4TA0A589 114 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 LRRD1A4D1F6 860 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 MTA2O94776 668 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 PROSCO94903 275 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 C4BPAP04003 597 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 ICAM3P32942 547 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 LMNB2Q03252 620 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 BYSLQ13895 437 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 LLGL2Q6P1M3 1020 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 CCDC89Q8N998 374 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 SAMD15Q9P1V8 674 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 IRF6O14896 467 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 DESP17661 470 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 BRD2P25440 801 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 FSTL1Q12841 308 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 TTLL4Q14679 1199 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 ZNF667Q5HYK9 610 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 GKAP1Q5VSY0 366 aaPredicted RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 TAS1R3Q7RTX0 852 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 CACNA2D3Q8IZS8 1091 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 FEZF2Q8TBJ5 459 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 HAUS1Q96CS2 278 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 RBM41Q96IZ5 413 aaKnown RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 TMEM134Q9H6X4 195 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 OGTO15294 1046 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 CAND2O75155 1236 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 PPFIA2O75334 1257 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 ARL2P36404 184 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 PEX5P50542 639 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 MYL6P60660 151 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 DPY19L2Q6NUT2 758 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 FBXO16Q8IX29 292 aaPredicted RBP12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 TMEM174Q8WUU8 243 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 MCEEQ96PE7 176 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 OSBPL8Q9BZF1 889 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 TRIM7Q9C029 511 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
PDXDC1-202ENST00000396410 SEMA4AQ9H3S1 761 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms