RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 GPR88Q9GZN0 384 aa15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 POLR3BQ9NW08 1133 aaPredicted RBP15.15■□□□□ 0.02
VCPKMT-201ENST00000395859 ZNF462Q96JM2 2506 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 PATE3B3GLJ2 98 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 RHOBTB1O94844 696 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 ADD1P35611 737 aaKnown RBP15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 ARL2P36404 184 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 MRPL58Q14197 206 aaKnown RBP15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 NECTIN1Q15223 517 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 TMEM196Q5HYL7 178 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 FSTL4Q6MZW2 842 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 LSG1Q9H089 658 aaKnown RBP15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 EBF1Q9UH73 591 aa15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 NUP210Q8TEM1 1887 aaPredicted RBP15.14■□□□□ 0.01
VCPKMT-201ENST00000395859 UNC79Q9P2D8 2635 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 TTLL13PA6NNM8 815 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 UPK3BL1B0FP48 263 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 UPK3BL2E5RIL1 263 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 PRRG1O14668 218 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 ZBTB39O15060 712 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 MEFVO15553 781 aaPredicted RBP15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 RECQL4O94761 1208 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 P4HBP07237 508 aaKnown RBP15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 YWHABP31946 246 aaKnown RBP15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 IRX4P78413 519 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 ELF2Q15723 593 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 UPP1Q16831 310 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 TPGS2Q68CL5 300 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 PMS2CLQ68D20 193 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 TMC8Q8IU68 726 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 GLIS3Q8NEA6 775 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 TTC8Q8TAM2 541 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 BICD2Q8TD16 824 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 TBCKQ8TEA7 893 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 ZFYVE19Q96K21 471 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 PPP1R10Q96QC0 940 aaKnown RBP15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 MTRQ99707 1265 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 CYP4F11Q9HBI6 524 aa15.13■□□□□ 0.01
VCPKMT-201ENST00000395859 GOLGA8AA7E2F4 631 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 GOLGA8BA8MQT2 603 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 I3L4J1 428 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 KHNYNO15037 678 aaKnown RBP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 PRPF3O43395 683 aaKnown RBP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 DKC1O60832 514 aaKnown RBP eCLIP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 ATG13O75143 517 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 B3GAT3O94766 335 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 GLRA2P23416 452 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 ELF1P32519 619 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 CLCNKBP51801 687 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 TNK2Q07912 1038 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 KARSQ15046 597 aaKnown RBP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 ARHGAP29Q52LW3 1261 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 MOXD1Q6UVY6 613 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 RAB44Q7Z6P3 723 aaPredicted RBP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 ARID3BQ8IVW6 561 aaPredicted RBP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 YAF2Q8IY57 180 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 TMEM209Q96SK2 561 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 OBP2AQ9NY56 170 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 EVLQ9UI08 416 aaPredicted RBP15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 SLC8A2Q9UPR5 921 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 TRIP11Q15643 1979 aa15.12■□□□□ 0.01
VCPKMT-201ENST00000395859 PLXNB3Q9ULL4 1909 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 HECTD1Q9ULT8 2610 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 CCDC194A0A1B0GVG4 234 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 SPAARA0A1B0GVQ0 90 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 H0Y626 953 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 M0R2N6 131 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 TRDMT1O14717 391 aaKnown RBP15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 TRIM16O95361 564 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 PRKCBP05771 671 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 MYL4P12829 197 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 BRCC3P46736 316 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 SCAPQ12770 1279 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 SEMA3BQ13214 749 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 TFDP1Q14186 410 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 FAM187BQ17R55 369 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 STXBP5Q5T5C0 1151 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 IQCEQ6IPM2 695 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 ZNF512Q96ME7 567 aaPredicted RBP15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 HHIPQ96QV1 700 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 LXNQ9BS40 222 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 RWDD1Q9H446 243 aaPredicted RBP15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 FZD8Q9H461 694 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 KCNMB3Q9NPA1 279 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 ASAH2Q9NR71 780 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 MAFFQ9ULX9 164 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 PI4KAP42356 2102 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 THADAQ6YHU6 1953 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 NID2Q14112 1375 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 GON4LQ3T8J9 2241 aa15.11■□□□□ 0.01
VCPKMT-201ENST00000395859 TBX3O15119 743 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 VNN2O95498 520 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 WEE1P30291 646 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 TWF1Q12792 350 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 XKR9Q5GH70 373 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 CHCHD4Q8N4Q1 142 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 BEST2Q8NFU1 509 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 FAM200AQ8TCP9 573 aa15.1■□□□□ 0.01
VCPKMT-201ENST00000395859 PRIMPOLQ96LW4 560 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms