RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 SYN3O14994 580 aa33.37■■■□□ 2.93
CMTM4-202ENST00000394106 SPATA1Q5VX52 437 aa33.37■■■□□ 2.93
CMTM4-202ENST00000394106 CRELD2Q6UXH1 353 aaPredicted RBP33.37■■■□□ 2.93
CMTM4-202ENST00000394106 GRAMD1CQ8IYS0 662 aa33.37■■■□□ 2.93
CMTM4-202ENST00000394106 SMG7Q92540 1137 aaKnown RBP33.37■■■□□ 2.93
CMTM4-202ENST00000394106 FAM213AQ9BRX8 229 aa33.37■■■□□ 2.93
CMTM4-202ENST00000394106 DENND4AQ7Z401 1863 aa33.37■■■□□ 2.93
CMTM4-202ENST00000394106 TCHHQ07283 1943 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 A0A1B0GVL5 298 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 PFKFB1P16118 471 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 RAB33AQ14088 237 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 TMEM31Q5JXX7 168 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 LIN9Q5TKA1 542 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 CCDC149Q6ZUS6 474 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 TDRD5Q8NAT2 981 aaKnown RBP33.36■■■□□ 2.93
CMTM4-202ENST00000394106 NOC3LQ8WTT2 800 aaKnown RBP33.36■■■□□ 2.93
CMTM4-202ENST00000394106 ASB7Q9H672 318 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 PIDD1Q9HB75 910 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 ZDHHC7Q9NXF8 308 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 DERAQ9Y315 318 aa33.36■■■□□ 2.93
CMTM4-202ENST00000394106 ZMYND10O75800 440 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 CMA1P23946 247 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 FAM26FQ5R3K3 315 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 UNC13DQ70J99 1090 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 ZSWIM2Q8NEG5 633 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 ZNF707Q96C28 371 aaPredicted RBP33.35■■■□□ 2.93
CMTM4-202ENST00000394106 CBWD1Q9BRT8 395 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 C11orf16Q9NQ32 467 aa33.35■■■□□ 2.93
CMTM4-202ENST00000394106 H7C4K7 107 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 SLFN14P0C7P3 912 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 GARTP22102 1010 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 CUL4BQ13620 913 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 CYP26C1Q6V0L0 522 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 APPL2Q8NEU8 664 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 PRKD2Q9BZL6 878 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 SCAND2PQ9GZW5 306 aaPredicted RBP33.34■■■□□ 2.93
CMTM4-202ENST00000394106 PCIF1Q9H4Z3 704 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 PCDHB8Q9UN66 801 aa33.34■■■□□ 2.93
CMTM4-202ENST00000394106 GOLGA8IPA6NC78 632 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 GOLGA8JA6NMD2 632 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 PPEF2O14830 753 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 ACTN4O43707 911 aaKnown RBP33.33■■■□□ 2.93
CMTM4-202ENST00000394106 C8AP07357 584 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 ARPP19P56211 112 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 ARMCX5Q6P1M9 558 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 C2CD2Q9Y426 696 aa33.33■■■□□ 2.93
CMTM4-202ENST00000394106 GPR37L1O60883 481 aa33.32■■■□□ 2.92
CMTM4-202ENST00000394106 IL18RAPO95256 599 aa33.32■■■□□ 2.92
CMTM4-202ENST00000394106 LDHAP00338 332 aaKnown RBP33.32■■■□□ 2.92
CMTM4-202ENST00000394106 POU5F1Q01860 360 aaKnown RBP33.32■■■□□ 2.92
CMTM4-202ENST00000394106 CTXN3Q4LDR2 81 aa33.32■■■□□ 2.92
CMTM4-202ENST00000394106 PPM1LQ5SGD2 360 aa33.32■■■□□ 2.92
CMTM4-202ENST00000394106 DSTYKQ6XUX3 929 aa33.32■■■□□ 2.92
CMTM4-202ENST00000394106 SLC7A14Q8TBB6 771 aa33.32■■■□□ 2.92
CMTM4-202ENST00000394106 EIF3DO15371 548 aaKnown RBP eCLIP33.31■■■□□ 2.92
CMTM4-202ENST00000394106 C9orf57Q5W0N0 161 aa33.31■■■□□ 2.92
CMTM4-202ENST00000394106 PAGE5Q96GU1 130 aa33.31■■■□□ 2.92
CMTM4-202ENST00000394106 LRFN3Q9BTN0 628 aa33.31■■■□□ 2.92
CMTM4-202ENST00000394106 RHOBTB2Q9BYZ6 727 aa33.31■■■□□ 2.92
CMTM4-202ENST00000394106 WDR6Q9NNW5 1121 aaKnown RBP33.31■■■□□ 2.92
CMTM4-202ENST00000394106 RBAKQ9NYW8 714 aaPredicted RBP33.31■■■□□ 2.92
CMTM4-202ENST00000394106 FBXL5Q9UKA1 691 aa33.31■■■□□ 2.92
CMTM4-202ENST00000394106 USTQ9Y2C2 406 aa33.31■■■□□ 2.92
CMTM4-202ENST00000394106 TIMM13Q9Y5L4 95 aaPredicted RBP33.31■■■□□ 2.92
CMTM4-202ENST00000394106 CLUHO75153 1309 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 M0QZQ0 153 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 EXTL3O43909 919 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 HOXD13P35453 343 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 ROR1Q01973 937 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 MRPL58Q14197 206 aaKnown RBP33.3■■■□□ 2.92
CMTM4-202ENST00000394106 SLC8B1Q6J4K2 584 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 ZNF280DQ6N043 979 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 EPM2AIP1Q7L775 607 aaPredicted RBP33.3■■■□□ 2.92
CMTM4-202ENST00000394106 OTOP3Q7RTS5 596 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 BRSK2Q8IWQ3 736 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 EFCAB13Q8IY85 973 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 ACSF2Q96CM8 615 aaPredicted RBP33.3■■■□□ 2.92
CMTM4-202ENST00000394106 GDPD2Q9HCC8 539 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 DPP3Q9NY33 737 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 HPSEQ9Y251 543 aa33.3■■■□□ 2.92
CMTM4-202ENST00000394106 PVALEFA0A1B0GWK0 134 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 TBC1D4O60343 1298 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 PAPLNO95428 1278 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 AARSP49588 968 aaKnown RBP eCLIP33.29■■■□□ 2.92
CMTM4-202ENST00000394106 WNT7BP56706 349 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 EHHADHQ08426 723 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 ZNF507Q8TCN5 953 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 EDAQ92838 391 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 LIMD1Q9UGP4 676 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 USP25Q9UHP3 1055 aa33.29■■■□□ 2.92
CMTM4-202ENST00000394106 CCL16O15467 120 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 HNRNPA1P09651 372 aaKnown RBP eCLIP33.28■■■□□ 2.92
CMTM4-202ENST00000394106 LILRA4P59901 499 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 PTPN21Q16825 1174 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 NELFCDQ8IXH7 590 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 ZDHHC14Q8IZN3 488 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 GPD1LQ8N335 351 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 PLCD3Q8N3E9 789 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 SLC39A2Q9NP94 309 aa33.28■■■□□ 2.92
CMTM4-202ENST00000394106 POLIQ9UNA4 740 aa33.28■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms