RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 ABRAQ8N0Z2 381 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 CNPY4Q8N129 248 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 ATXN2LQ8WWM7 1075 aaKnown RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 ATG4AQ8WYN0 398 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 VCPIP1Q96JH7 1222 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 C11orf70Q9BRQ4 267 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 MSTO1Q9BUK6 570 aa13.11□□□□□ -0.31
RFC5-201ENST00000392542 TARS2Q9BW92 718 aaKnown RBP13.11□□□□□ -0.31
RFC5-201ENST00000392542 GAS8O95995 478 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 CFHP08603 1231 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 TBXAS1P24557 533 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 ZBTB41Q5SVQ8 909 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 GKAP1Q5VSY0 366 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 CCDC121Q6ZUS5 278 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 PHF13Q86YI8 300 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 APOBEC3FQ8IUX4 373 aaKnown RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 CABS1Q96KC9 395 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 MRPL47Q9HD33 250 aaKnown RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 HOXC10Q9NYD6 342 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 ADAM22Q9P0K1 906 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 CNTN6Q9UQ52 1028 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 A0A0B4J269 797 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 IVDP26440 423 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 SLCO1A2P46721 670 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 CAV1Q03135 178 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 KLF1Q13351 362 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 PPP1R2P3Q6NXS1 205 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 PASD1Q8IV76 773 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 RBBP8NLQ8NC74 664 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 DNERQ8NFT8 737 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 ATL2Q8NHH9 583 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 SLC7A3Q8WY07 619 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 NIFKQ9BYG3 293 aaKnown RBP13.1□□□□□ -0.31
RFC5-201ENST00000392542 EFCC1Q9HA90 598 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 ANKFY1Q9P2R3 1169 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 SCINQ9Y6U3 715 aa13.1□□□□□ -0.31
RFC5-201ENST00000392542 ADGRA2Q96PE1 1338 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 EDN1P05305 212 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 RALAP11233 206 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 CHKAP35790 457 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 TAS2R40P59535 323 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 ACTN3Q08043 901 aaPredicted RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 MAMLD1Q13495 774 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 ANGEL2Q5VTE6 544 aaKnown RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 FBXW10Q5XX13 1052 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 PLEKHA7Q6IQ23 1121 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 TAOK1Q7L7X3 1001 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 CCDC50Q8IVM0 306 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 KATNAL2Q8IYT4 538 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 ZNF317Q96PQ6 595 aaPredicted RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 DDX23Q9BUQ8 820 aaKnown RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 TMEM134Q9H6X4 195 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 FBXO40Q9UH90 709 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 R3HDM2Q9Y2K5 976 aaKnown RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 NUB1Q9Y5A7 615 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 WDR90Q96KV7 1748 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 IGKV6D-21A0A0A0MT36 114 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 H0YHG0 523 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 O00370 1275 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 ATF2P15336 505 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 RFC5P40937 340 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 BAG6P46379 1132 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 ITGA8P53708 1063 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 C1QBPQ07021 282 aaKnown RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 PLCB4Q15147 1175 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 DAB2IPQ5VWQ8 1189 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 MMS22LQ6ZRQ5 1243 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 DEFB132Q7Z7B7 95 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 CHST13Q8NET6 341 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 OR5B17Q8NGF7 314 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 CCDC134Q9H6E4 229 aa13.09□□□□□ -0.31
RFC5-201ENST00000392542 ACTR5Q9H9F9 607 aaPredicted RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 INTS9Q9NV88 658 aaKnown RBP13.09□□□□□ -0.31
RFC5-201ENST00000392542 FZD9O00144 591 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 THAP12O43422 761 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 ACSL3O95573 720 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 NCOA4Q13772 614 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 TRIP13Q15645 432 aaPredicted RBP13.08□□□□□ -0.32
RFC5-201ENST00000392542 CCNG2Q16589 344 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 SEPT14Q6ZU15 432 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 TRAIPQ9BWF2 469 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 HEMGNQ9BXL5 484 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 OSBPL8Q9BZF1 889 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 GOLGA6L7A0A1B0GV03 622 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 TLR3O15455 904 aaKnown RBP13.08□□□□□ -0.32
RFC5-201ENST00000392542 SSTR3P32745 418 aaPredicted RBP13.08□□□□□ -0.32
RFC5-201ENST00000392542 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 FSTL1Q12841 308 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 CAPSQ13938 189 aa13.08□□□□□ -0.32
RFC5-201ENST00000392542 TARBP2Q15633 366 aaKnown RBP13.08□□□□□ -0.32
RFC5-201ENST00000392542 NOL9Q5SY16 702 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms