RNA–Protein interactions for RNA: ENST00000390400.2

TRBV28-201, Transcript of T cell receptor beta variable 28, humanhuman

APPRIS P1 BASIC

Gene TRBV28, Length 364 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV28-201ENST00000390400 LOC100289279A0A1B0GTE1 492 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 SHISA8B8ZZ34 492 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 AKR1B15C9JRZ8 316 aaPredicted RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 SPTLC2O15270 562 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 FOXN1O15353 648 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 EIF3HO15372 352 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 DEAF1O75398 565 aaPredicted RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 TDP2O95551 362 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 HSPA1AP0DMV8 641 aaKnown RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 HSPA1BP0DMV9 641 aaKnown RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 VSIG8P0DPA2 414 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 HSPA8P11142 646 aaKnown RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 NME1P15531 152 aaKnown RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ZNF18P17022 549 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ITGB5P18084 799 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 PLCG1P19174 1290 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ALAS2P22557 587 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 CYP3A7P24462 503 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 HNRNPH1P31943 449 aaKnown RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ELF1P32519 619 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 MCM7P33993 719 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 SPAG1Q07617 926 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 DPCR1Q3MIW9 517 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 GNPTABQ3T906 1256 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 CEP55Q53EZ4 464 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 PRR16Q569H4 304 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ZC3H12AQ5D1E8 599 aaKnown RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 LRCH2Q5VUJ6 765 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ANO1Q5XXA6 986 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 PPP4R3AQ6IN85 833 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 MAMDC4Q6UXC1 1216 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 NIPA1Q7RTP0 329 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ZNF572Q7Z3I7 529 aaPredicted RBP8.12□□□□□ -1.11
TRBV28-201ENST00000390400 KIAA1328Q86T90 577 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 NLRX1Q86UT6 975 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 RAET1EQ8TD07 263 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 MORC4Q8TE76 937 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 DHX58Q96C10 678 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 FAM210AQ96ND0 272 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 USP28Q96RU2 1077 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 SH3GL2Q99962 352 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 MXRA8Q9BRK3 442 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 CRACR2AQ9BSW2 395 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 GOLPH3LQ9H4A5 285 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 HOMER3Q9NSC5 361 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 ZMYM5Q9UJ78 669 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 CEP131Q9UPN4 1083 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 TRIM17Q9Y577 477 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 PCDHB6Q9Y5E3 794 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 UBIAD1Q9Y5Z9 338 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 PCNTO95613 3336 aa8.12□□□□□ -1.11
TRBV28-201ENST00000390400 KLHL33A6NCF5 533 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 FAM86B1E9PN63 330 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MEIS1O00470 390 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MEFVO15553 781 aaPredicted RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 SLC37A4O43826 429 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 EDIL3O43854 480 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MARCH6O60337 910 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 ZNF202O95125 648 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CYP11A1P05108 521 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 FAM86B2P0C5J1 330 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 POLR2BP30876 1174 aaKnown RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 NTF4P34130 210 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MRPS9P82933 396 aaKnown RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CEBPZQ03701 1054 aaKnown RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MTMR1Q13613 665 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 STK38Q15208 465 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CALCRLQ16602 461 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CCL14Q16627 93 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 Q4G0T1 1027 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 LCE2CQ5TA81 110 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MFSD14CQ5VZR4 134 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 ISM2Q6H9L7 571 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 EMBQ6PCB8 327 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 EEPD1Q7L9B9 569 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 OTOP1Q7RTM1 612 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 EGFL6Q8IUX8 553 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 FBXO16Q8IX29 292 aaPredicted RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CACTIN-AS1Q8N1I8 211 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 TC2NQ8N9U0 490 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CYP2W1Q8TAV3 490 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CCHCR1Q8TD31 782 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 KLHL6Q8WZ60 621 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 WNT8BQ93098 351 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 ACSF2Q96CM8 615 aaPredicted RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CDHR1Q96JP9 859 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 MBOAT7Q96N66 472 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 INPP4AQ96PE3 977 aaPredicted RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 PYM1Q9BRP8 204 aaKnown RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 FTOQ9C0B1 505 aaKnown RBP eCLIP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 VTA1Q9NP79 307 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 JADE2Q9NQC1 790 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 ZNHIT6Q9NWK9 470 aaKnown RBP8.11□□□□□ -1.11
TRBV28-201ENST00000390400 FLRT1Q9NZU1 646 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 PCDHA7Q9UN72 937 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 CLIC4Q9Y696 253 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 FAM169AQ9Y6X4 670 aa8.11□□□□□ -1.11
TRBV28-201ENST00000390400 IGLV3-22A0A075B6J6 115 aa8.1□□□□□ -1.11
TRBV28-201ENST00000390400 CCDC189A1A4V9 331 aa8.1□□□□□ -1.11
TRBV28-201ENST00000390400 GOLGA6CA6NDK9 693 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms