RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 PCNX4Q63HM2 1172 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 SYDE1Q6ZW31 735 aaPredicted RBP19.1■□□□□ 0.65
GNE-201ENST00000377902 PODNQ7Z5L7 613 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 TRABD2AQ86V40 505 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 CDAN1Q8IWY9 1227 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 FBF1Q8TES7 1133 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 PLCD4Q9BRC7 762 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 OSBPL8Q9BZF1 889 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 COQ4Q9Y3A0 265 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 NUMBLQ9Y6R0 609 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 UMODL1Q5DID0 1318 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 H0Y3Z8 333 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 ECE2O60344 883 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 T-ENOLP0DO92 83 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 KLRC2P26717 231 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 DSG3P32926 999 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 CAV1Q03135 178 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 MTM1Q13496 603 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 STAT4Q14765 748 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 TAF11Q15544 211 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 SLC1A5Q15758 541 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 TMEM161BQ8NDZ6 487 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 BSNDQ8WZ55 320 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 CNKSR1Q969H4 720 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 LRRC37BQ96QE4 947 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.1■□□□□ 0.65
GNE-201ENST00000377902 TMX2Q9Y320 296 aa19.1■□□□□ 0.65
GNE-201ENST00000377902 ASTN2O75129 1339 aaPredicted RBP19.1■□□□□ 0.65
GNE-201ENST00000377902 CLRN2A0PK11 232 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 DENND3A2RUS2 1198 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 SMNDC1O75940 238 aaKnown RBP eCLIP19.09■□□□□ 0.65
GNE-201ENST00000377902 MAPTP10636 758 aaKnown RBP19.09■□□□□ 0.65
GNE-201ENST00000377902 EPHB2P29323 1055 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 NPTX2P47972 431 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 XKR9Q5GH70 373 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 ZNF622Q969S3 477 aaKnown RBP eCLIP19.09■□□□□ 0.65
GNE-201ENST00000377902 LBHD1Q9BQE6 289 aaPredicted RBP19.09■□□□□ 0.65
GNE-201ENST00000377902 CCDC77Q9BR77 488 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 C12orf65Q9H3J6 166 aaKnown RBP19.09■□□□□ 0.65
GNE-201ENST00000377902 HOMER2Q9NSB8 354 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 USP21Q9UK80 565 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 DNPEPQ9ULA0 475 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.09■□□□□ 0.65
GNE-201ENST00000377902 SLX4Q8IY92 1834 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 ATP9AO75110 1047 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 KRT15P19012 456 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 NCKAP1LP55160 1127 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 MRPS9P82933 396 aaKnown RBP19.09■□□□□ 0.65
GNE-201ENST00000377902 MOGSQ13724 837 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 ALCAMQ13740 583 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 CCNG2Q16589 344 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 CCDC89Q8N998 374 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 FAM13CQ8NE31 585 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 TTC8Q8TAM2 541 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 DENND1AQ8TEH3 1009 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 ZNF516Q92618 1163 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 ACSF2Q96CM8 615 aaPredicted RBP19.09■□□□□ 0.65
GNE-201ENST00000377902 HAUS1Q96CS2 278 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 TRABDQ9H4I3 376 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 EHMT1Q9H9B1 1298 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 BATF3Q9NR55 127 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 UBR3Q6ZT12 1888 aa19.09■□□□□ 0.65
GNE-201ENST00000377902 PMM2O15305 246 aa19.08■□□□□ 0.65
GNE-201ENST00000377902 MYCNP04198 464 aaPredicted RBP19.08■□□□□ 0.65
GNE-201ENST00000377902 MAN1A1P33908 653 aa19.08■□□□□ 0.65
GNE-201ENST00000377902 WNT7BP56706 349 aa19.08■□□□□ 0.65
GNE-201ENST00000377902 STRIP1Q5VSL9 837 aa19.08■□□□□ 0.65
GNE-201ENST00000377902 TMEM174Q8WUU8 243 aa19.08■□□□□ 0.65
GNE-201ENST00000377902 SLC7A6OSQ96CW6 309 aaPredicted RBP19.08■□□□□ 0.65
GNE-201ENST00000377902 AGO4Q9HCK5 861 aaKnown RBP19.08■□□□□ 0.65
GNE-201ENST00000377902 GOLGA8SH3BPF8 625 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 GOLGA8MH3BSY2 632 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 MAPK13O15264 365 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 PEX11AO75192 247 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 GCKP35557 465 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 PSMC4P43686 418 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 NSFP46459 744 aaKnown RBP19.08■□□□□ 0.64
GNE-201ENST00000377902 SETDB1Q15047 1291 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 TKFCQ3LXA3 575 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 ZFYVE27Q5T4F4 411 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 LONP2Q86WA8 852 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 FAM213AQ9BRX8 229 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 TBC1D10AQ9BXI6 508 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 TXLNGQ9NUQ3 528 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 STARD13Q9Y3M8 1113 aa19.08■□□□□ 0.64
GNE-201ENST00000377902 WDR91A4D1P6 747 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 PROSCO94903 275 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 PECAM1P16284 738 aaPredicted RBP19.07■□□□□ 0.64
GNE-201ENST00000377902 GNAZP19086 355 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 SKIV2L2P42285 1042 aaKnown RBP19.07■□□□□ 0.64
GNE-201ENST00000377902 NOP14P78316 857 aaKnown RBP19.07■□□□□ 0.64
GNE-201ENST00000377902 CENPCQ03188 943 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 CCDC15Q0P6D6 951 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 CAPRIN2Q6IMN6 1127 aaKnown RBP19.07■□□□□ 0.64
GNE-201ENST00000377902 ZCCHC9Q8N567 271 aaKnown RBP19.07■□□□□ 0.64
GNE-201ENST00000377902 MAIP1Q8WWC4 291 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 GRAMD1AQ96CP6 724 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 LRMDAQ9H2I8 198 aa19.07■□□□□ 0.64
GNE-201ENST00000377902 VPS37BQ9H9H4 285 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms