RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 POLR3FQ9H1D9 316 aaPredicted RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 GANQ9H2C0 597 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 SAR1AQ9NR31 198 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MRGBPQ9NV56 204 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 PAPOLAP51003 745 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 PSMC1P62191 440 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 TNFAIP2Q03169 654 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 STX3Q13277 289 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 SESTD1Q86VW0 696 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 PDZD8Q8NEN9 1154 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 CPA5Q8WXQ8 436 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 MTBPQ96DY7 904 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 FAM167AQ96KS9 214 aa9.24□□□□□ -0.93
PCDH9-202ENST00000377865 NXF1Q9UBU9 619 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 RPL26L1Q9UNX3 145 aaKnown RBP9.24□□□□□ -0.93
PCDH9-202ENST00000377865 DISP2A7MBM2 1401 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 B2RBV5 119 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 APOL1O14791 398 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 ATMINO43313 823 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 RALAP11233 206 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 EIF2AK2P19525 551 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 RFC1P35251 1148 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 PTK6Q13882 451 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 FAM196AQ6ZSG2 479 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 DNAAF3Q8N9W5 541 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 SEMA4AQ9H3S1 761 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 PCYOX1Q9UHG3 505 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 FOXN3O00409 490 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 ABL1P00519 1130 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 SNRPAP09012 282 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 ALDH5A1P51649 535 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 MARSP56192 900 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 JADE1Q6IE81 842 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 IRGCQ6NXR0 463 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 FEZF2Q8TBJ5 459 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 RBAKQ9NYW8 714 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 AGO2Q9UKV8 859 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 PFDN6O15212 129 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 SAT1P21673 171 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 RIPK1Q13546 671 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 THOC5Q13769 683 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 MTFR1Q15390 333 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 HIPK4Q8NE63 616 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 ACAP3Q96P50 834 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 INPP4AQ96PE3 977 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 MSH4O15457 936 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 AKAP3O75969 853 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 SREBF1P36956 1147 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 SKIV2L2P42285 1042 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 KDSRQ06136 332 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 XRCC4Q13426 336 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 CNGA2Q16280 664 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 NAIF1Q69YI7 327 aaPredicted RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 KLC3Q6P597 504 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 SP8Q8IXZ3 490 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 RASGEF1CQ8N431 466 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 STK32AQ8WU08 396 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 CKAP2Q8WWK9 683 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 DBNDD1Q9H9R9 158 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 HERC5Q9UII4 1024 aaKnown RBP9.23□□□□□ -0.93
PCDH9-202ENST00000377865 STARD13Q9Y3M8 1113 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 PCDHA3Q9Y5H8 950 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 MST1RQ04912 1400 aa9.23□□□□□ -0.93
PCDH9-202ENST00000377865 AGPSO00116 658 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 DDX3XO00571 662 aaKnown RBP eCLIP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 SNX3O60493 162 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 SGPL1O95470 568 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 FGRP09769 529 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PAX7P23759 505 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 MCL1Q07820 350 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 NFX1Q12986 1120 aaKnown RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 HHIPL2Q6UWX4 724 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PODNQ7Z5L7 613 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CCNYQ8ND76 341 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 FAM192AQ9GZU8 254 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 TRPV6Q9H1D0 765 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 C2orf40Q9H1Z8 148 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 ANLNQ9NQW6 1124 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CYP39A1Q9NYL5 469 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PAK5Q9P286 719 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 AFF2P51816 1311 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PIK3CDO00329 1044 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 RGL2O15211 777 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 FKBP6O75344 327 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 FDX1P10109 184 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 KRT10P13645 584 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 ADRM1Q16186 407 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 CNGA3Q16281 694 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 E2F7Q96AV8 911 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 SLC13A1Q9BZW2 595 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 DCLK3Q9C098 648 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 SMYD2Q9NRG4 433 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 IL17RBQ9NRM6 502 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 LRCH1Q9Y2L9 728 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 ROBO3Q96MS0 1386 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 C3orf62Q6ZUJ4 267 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 SETD3Q86TU7 594 aaPredicted RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 PRPF39Q86UA1 669 aaKnown RBP9.22□□□□□ -0.93
PCDH9-202ENST00000377865 HACE1Q8IYU2 909 aa9.22□□□□□ -0.93
PCDH9-202ENST00000377865 C4orf32Q8N8J7 132 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms