RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ZFP14Q9HCL3 533 aa14.39□□□□□ -0.11
CLCN6-205ENST00000376492 TUFT1Q9NNX1 390 aa14.39□□□□□ -0.11
CLCN6-205ENST00000376492 INSL5Q9Y5Q6 135 aa14.39□□□□□ -0.11
CLCN6-205ENST00000376492 PIAS3Q9Y6X2 628 aa14.39□□□□□ -0.11
CLCN6-205ENST00000376492 MAP1BP46821 2468 aaKnown RBP14.38□□□□□ -0.11
CLCN6-205ENST00000376492 ARHGEF35A5YM69 484 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 MAN2B1O00754 1011 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 TRAPPC3O43617 180 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 ADRB1P08588 477 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 ATF2P15336 505 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 GJA1P17302 382 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 PDCP20941 246 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 ELF1P32519 619 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 OSTNP61366 133 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 DMWDQ09019 674 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 SRSF5Q13243 272 aaKnown RBP14.38□□□□□ -0.11
CLCN6-205ENST00000376492 GAS6Q14393 721 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 RILPL1Q5EBL4 403 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 LAIR1Q6GTX8 287 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 PDZD4Q76G19 769 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-205ENST00000376492 HS6ST3Q8IZP7 471 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 NACC1Q96RE7 527 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 LMAN1LQ9HAT1 526 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 ZNF334Q9HCZ1 680 aaPredicted RBP14.38□□□□□ -0.11
CLCN6-205ENST00000376492 RAB23Q9ULC3 237 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 PCDHB6Q9Y5E3 794 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 F5P12259 2224 aa14.38□□□□□ -0.11
CLCN6-205ENST00000376492 CFAP47Q6ZTR5 3102 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-205ENST00000376492 LAD1O00515 517 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 PODXLO00592 558 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 MOSPD3O75425 235 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 PSMC3P17980 439 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 CCR3P51677 355 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 NRLP54845 237 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 PTGDRQ13258 359 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 NBR1Q14596 966 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 ST3GAL2Q16842 350 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 PPM1JQ5JR12 505 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 TCEAL8Q8IYN2 117 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 CELF5Q8N6W0 485 aaKnown RBP14.37□□□□□ -0.11
CLCN6-205ENST00000376492 NETO1Q8TDF5 533 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 SMARCD2Q92925 531 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 IRF7Q92985 503 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 ZMAT2Q96NC0 199 aaKnown RBP14.37□□□□□ -0.11
CLCN6-205ENST00000376492 POLR3CQ9BUI4 534 aaPredicted RBP14.37□□□□□ -0.11
CLCN6-205ENST00000376492 CDT1Q9H211 546 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.37□□□□□ -0.11
CLCN6-205ENST00000376492 CEP72Q9P209 647 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 FBXL5Q9UKA1 691 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 USP24Q9UPU5 2620 aa14.37□□□□□ -0.11
CLCN6-205ENST00000376492 CHURC1-FNTBB4DL54 471 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 ARNTLO00327 626 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 ZNF197O14709 1029 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 SLC30A4O14863 429 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 MICAL2O94851 1124 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 RETP07949 1114 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 CHRNB1P11230 501 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 CCNE1P24864 410 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 HOXC13P31276 330 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 GRM5P41594 1212 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 FNTBP49356 437 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 FXR2P51116 673 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLCN6-205ENST00000376492 EFNA5P52803 228 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 TWF1Q12792 350 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 PDIA5Q14554 519 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 PPP2R5DQ14738 602 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 PPP2R5AQ15172 486 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 MAMSTRQ6ZN01 415 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 TMEM130Q8N3G9 435 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 ZSCAN18Q8TBC5 510 aaPredicted RBP14.36□□□□□ -0.11
CLCN6-205ENST00000376492 C18orf25Q96B23 403 aaPredicted RBP14.36□□□□□ -0.11
CLCN6-205ENST00000376492 RSPRY1Q96DX4 576 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 IER2Q9BTL4 223 aa14.36□□□□□ -0.11
CLCN6-205ENST00000376492 RBM12Q9NTZ6 932 aaKnown RBP14.36□□□□□ -0.11
CLCN6-205ENST00000376492 SYN3O14994 580 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 MEFVO15553 781 aaPredicted RBP14.35□□□□□ -0.11
CLCN6-205ENST00000376492 HRO43593 1189 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 GDF9O60383 454 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 MYL4P12829 197 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 SYT1P21579 422 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 RPA1P27694 616 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 PRPHP41219 470 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 CXCL12P48061 93 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 SOX9P48436 509 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 YARSP54577 528 aaKnown RBP14.35□□□□□ -0.11
CLCN6-205ENST00000376492 SIM2Q14190 667 aaPredicted RBP14.35□□□□□ -0.11
CLCN6-205ENST00000376492 MRPL58Q14197 206 aaKnown RBP14.35□□□□□ -0.11
CLCN6-205ENST00000376492 TEAD2Q15562 447 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 ECM1Q16610 540 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 ZNF568Q3ZCX4 644 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 CTXN3Q4LDR2 81 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 XKR4Q5GH76 650 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 WDR44Q5JSH3 913 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 CYP4A22Q5TCH4 519 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 ALKAL1Q6UXT8 129 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 PRR23CQ6ZRP0 262 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 Q6ZS52 159 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
CLCN6-205ENST00000376492 IFT74Q96LB3 600 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms