RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 ANKFY1Q9P2R3 1169 aa21.79■■□□□ 1.08
TMEFF1-201ENST00000374879 COL24A1Q17RW2 1714 aa21.79■■□□□ 1.08
TMEFF1-201ENST00000374879 POC1B-GALNT4F8VUJ3 575 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 NR3C1P04150 777 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 HNRNPCP07910 306 aaKnown RBP eCLIP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 ESRRAP11474 423 aaPredicted RBP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 KRT15P19012 456 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 ADCY8P40145 1251 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 PIK3CAP42336 1068 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 CBX3Q13185 183 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 LVRNQ6Q4G3 990 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 ZNF398Q8TD17 642 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 SNRNP27Q8WVK2 155 aaKnown RBP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 TRAIPQ9BWF2 469 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 EXOC1LA0A1B0GW35 172 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 GSTTP1A0A1W2PQM5 241 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 POTEB3A0JP26 581 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 POTECB2RU33 542 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 TROVE2P10155 538 aaKnown RBP eCLIP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 PPP4CP60510 307 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 PLOD1Q02809 727 aaPredicted RBP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 POTEBQ6S5H4 581 aa21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 ARHGEF1Q92888 912 aaKnown RBP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 TYW1Q9NV66 732 aaKnown RBP21.78■■□□□ 1.08
TMEFF1-201ENST00000374879 GTPBP10A4D1E9 387 aaKnown RBP21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 ATMINO43313 823 aaPredicted RBP21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 CALUO43852 315 aaPredicted RBP21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 ATP9BO43861 1147 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 ZNF862O60290 1169 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 ATF2P15336 505 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 CPA2P48052 419 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 LZTS2Q9BRK4 669 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 NDE1Q9NXR1 346 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 TMEM221A6NGB7 291 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 SPOPO43791 374 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 ZNF189O75820 626 aaPredicted RBP21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 USP17L2Q6R6M4 530 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 ACAD11Q709F0 780 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 SYT2Q8N9I0 419 aaPredicted RBP21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 HAUS1Q96CS2 278 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 AGPAT1Q99943 283 aa21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 SMG5Q9UPR3 1016 aaKnown RBP21.77■■□□□ 1.08
TMEFF1-201ENST00000374879 A0A1W2PPM1 405 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 MARCH6O60337 910 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 ZBED4O75132 1171 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 LRRN2O75325 713 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 RARBP10826 455 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 SLC18A1P54219 525 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 PTK6Q13882 451 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 MRRFQ96E11 262 aaKnown RBP21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 EYA3Q99504 573 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 UBA5Q9GZZ9 404 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 FRMPD4Q14CM0 1322 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 PDXKO00764 312 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 GAS8O95995 478 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 LDHCP07864 332 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 EIF4BP23588 611 aaKnown RBP21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 RRM1P23921 792 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 GPC5P78333 572 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 ZBTB16Q05516 673 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 NR1H3Q13133 447 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 ZNF746Q6NUN9 644 aaPredicted RBP21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 RAPH1Q70E73 1250 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 ZNF804AQ7Z570 1209 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 CATSPER2Q96P56 530 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 RAP1GDS1P52306 607 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 GRAPQ13588 217 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 TTC7BQ86TV6 843 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 SFR1Q86XK3 245 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 ZBTB8BQ8NAP8 495 aaPredicted RBP21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 GRAPLQ8TC17 118 aaPredicted RBP21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 RTFDC1Q9BY42 306 aaPredicted RBP21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 ZNF287Q9HBT7 754 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 PPM1HQ9ULR3 514 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 PCDHA12Q9UN75 941 aa21.76■■□□□ 1.07
TMEFF1-201ENST00000374879 NAV1Q8NEY1 1877 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 TNRC6CQ9HCJ0 1690 aaKnown RBP21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 SMIM31A0A1B0GVY4 71 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 F8W8V4 182 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 TYROBPO43914 113 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 SORBS3O60504 671 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 SUPT3HO75486 399 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 BTDP43251 543 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 CDK8P49336 464 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 ADARP55265 1226 aaKnown RBP21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 CAV1Q03135 178 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 KCNA1Q09470 495 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 TMED1Q13445 227 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 TMEM259Q4ZIN3 620 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 KLC3Q6P597 504 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 CCDC174Q6PII3 467 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 RIPOR1Q6ZS17 1223 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 COA7Q96BR5 231 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 PANX3Q96QZ0 392 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 IKZF4Q9H2S9 585 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 CCNL1Q9UK58 526 aaPredicted RBP21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 ASTN1O14525 1302 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 FOXN3O00409 490 aaPredicted RBP21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 MAGEB3O15480 346 aa21.75■■□□□ 1.07
TMEFF1-201ENST00000374879 FUT4P22083 530 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms