RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 PTPRJQ12913 1337 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 WNT10BO00744 389 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 UBOX5O94941 541 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 VNN1O95497 513 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 NOMO3P69849 1222 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 LMBRD2Q68DH5 695 aaPredicted RBP13.55□□□□□ -0.24
CTPS1-202ENST00000372621 PLEKHA7Q6IQ23 1121 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 NLRX1Q86UT6 975 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 MCPH1Q8NEM0 835 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 AGBL3Q8NEM8 1001 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 DYDC1Q8WWB3 177 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 KCNN1Q92952 543 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 VCPIP1Q96JH7 1222 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 NAALADL1Q9UQQ1 740 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 MAFGO15525 162 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 RGS20O76081 388 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 HLA-DRAP01903 254 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 BRAFP15056 766 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 NCALDP61601 193 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 LARGE2Q8N3Y3 721 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 CCDC89Q8N998 374 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 BBOF1Q8ND07 529 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 EXD1Q8NHP7 514 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 ATP6V0A1Q93050 837 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 MYCBPQ99417 103 aaPredicted RBP13.55□□□□□ -0.24
CTPS1-202ENST00000372621 OSBPL8Q9BZF1 889 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 KIAA1586Q9HCI6 787 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 ACTL7BQ9Y614 415 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 MYH9P35579 1960 aaKnown RBP13.55□□□□□ -0.24
CTPS1-202ENST00000372621 NFASCO94856 1347 aa13.55□□□□□ -0.24
CTPS1-202ENST00000372621 CDH16O75309 829 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 NUGGCQ68CJ6 796 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 SPOPLQ6IQ16 392 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CGB2Q6NT52 195 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CRELD2Q6UXH1 353 aaPredicted RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 PHF13Q86YI8 300 aaPredicted RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 ABRAQ8N0Z2 381 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 TEPSINQ96N21 525 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 APOBEC3GQ9HC16 384 aaKnown RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 NOD2Q9HC29 1040 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 ZNF277Q9NRM2 450 aaPredicted RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CNTN6Q9UQ52 1028 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 RIPK3Q9Y572 518 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 SUN1O94901 812 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CCND2P30279 289 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 SLC8A1P32418 973 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 VPS41P49754 854 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 NLRP11P59045 1033 aaKnown RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 BNIP1Q12981 228 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 ZNF268Q14587 947 aaPredicted RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 WDR44Q5JSH3 913 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 TRIM72Q6ZMU5 477 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 ANKRD42Q8N9B4 389 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 WNK4Q96J92 1243 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 FAM118BQ9BPY3 351 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 HAPLN2Q9GZV7 340 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 MLXIPLQ9NP71 852 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 KCNK9Q9NPC2 374 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CYP26B1Q9NR63 512 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 VWA5AO00534 786 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 NR3C2P08235 984 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 ABHD2P08910 425 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 MKRN3Q13064 507 aaKnown RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 BAATQ14032 418 aaPredicted RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CCDC142Q17RM4 750 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 IZUMO3Q5VZ72 239 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 SWSAP1Q6NVH7 229 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 MAGEB18Q96M61 343 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 C11orf70Q9BRQ4 267 aa13.54□□□□□ -0.24
CTPS1-202ENST00000372621 MRPL47Q9HD33 250 aaKnown RBP13.54□□□□□ -0.24
CTPS1-202ENST00000372621 CUL2Q13617 745 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 STAT4Q14765 748 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 LIN9Q5TKA1 542 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 SPATA21Q7Z572 469 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 CCDC60Q8IWA6 550 aaPredicted RBP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ZCCHC9Q8N567 271 aaKnown RBP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 GBP7Q8N8V2 638 aaPredicted RBP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 MAML1Q92585 1016 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 BICD1Q96G01 975 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 POLR3FQ9H1D9 316 aaPredicted RBP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ATP6V0A4Q9HBG4 840 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ADAM22Q9P0K1 906 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 GGT7Q9UJ14 662 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 SCAF8Q9UPN6 1271 aaKnown RBP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ARL2BPQ9Y2Y0 163 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 DKC1O60832 514 aaKnown RBP eCLIP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ZBED4O75132 1171 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 GCAP28676 217 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ABCD1P33897 745 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 PIK3CAP42336 1068 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 NEDD9Q14511 834 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ZNF365Q70YC5 407 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 TBC1D1Q86TI0 1168 aaPredicted RBP13.53□□□□□ -0.24
CTPS1-202ENST00000372621 PRUNE1Q86TP1 453 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 GDAP1Q8TB36 358 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 FOXP3Q9BZS1 431 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
CTPS1-202ENST00000372621 H0YCG3 227 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms