RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 GJB7Q6PEY0 223 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 MPZL3Q6UWV2 235 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 ZNF571Q7Z3V5 609 aaPredicted RBP17.26■□□□□ 0.35
C9orf78-201ENST00000372447 ZBTB33Q86T24 672 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 RNF10Q8N5U6 811 aaKnown RBP17.26■□□□□ 0.35
C9orf78-201ENST00000372447 ALS2CR12Q96Q35 445 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 C1orf112Q9NSG2 853 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 ARGLU1Q9NWB6 273 aaPredicted RBP17.26■□□□□ 0.35
C9orf78-201ENST00000372447 DAAM1Q9Y4D1 1078 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 PCDHB2Q9Y5E7 798 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 STYXL1Q9Y6J8 313 aa17.26■□□□□ 0.35
C9orf78-201ENST00000372447 CTAGE15A4D2H0 777 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 CTAGE8P0CG41 777 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 IBSPP21815 317 aaPredicted RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 DEFB103AP81534 67 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ZNF568Q3ZCX4 644 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 RASIP1Q5U651 963 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 CTAGE6Q86UF2 777 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 CTAGE4Q8IX94 777 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 CRIPAKQ8N1N5 446 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 SMG8Q8ND04 991 aaKnown RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ADPGKQ9BRR6 497 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 INTS2Q9H0H0 1204 aaKnown RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 CDT1Q9H211 546 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 EPC1Q9H2F5 836 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 LAMA3Q16787 3333 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 LAMA2P24043 3122 aaKnown RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 N4BP1O75113 896 aaKnown RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ZNF623O75123 536 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ATF7P17544 494 aaPredicted RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ANXA13P27216 316 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 BMP8BP34820 402 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 STAT1P42224 750 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 CLCN6P51797 869 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 DLG4P78352 724 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 MCL1Q07820 350 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 C10orf76Q5T2E6 689 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 TMCO2Q7Z6W1 182 aaPredicted RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ECHDC2Q86YB7 292 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 NOX5Q96PH1 765 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 ARID3AQ99856 593 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 STK33Q9BYT3 514 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
C9orf78-201ENST00000372447 SALL4Q9UJQ4 1053 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 DNAJC12Q9UKB3 198 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 HES2Q9Y543 173 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 IPPQ9Y573 584 aa17.25■□□□□ 0.35
C9orf78-201ENST00000372447 A0A0B4J269 797 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 P4HA2O15460 535 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 FERP16591 822 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 MATR3P43243 847 aaKnown RBP eCLIP17.24■□□□□ 0.35
C9orf78-201ENST00000372447 RAB27AP51159 221 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 SLFN12LQ6IEE8 588 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 CHRDL2Q6WN34 429 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 ZNF598Q86UK7 904 aaKnown RBP17.24■□□□□ 0.35
C9orf78-201ENST00000372447 CEP120Q8N960 986 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 ZSWIM2Q8NEG5 633 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 TOP1MTQ969P6 601 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 RNF39Q9H2S5 420 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 NXF3Q9H4D5 531 aaKnown RBP17.24■□□□□ 0.35
C9orf78-201ENST00000372447 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 MICAL3Q7RTP6 2002 aa17.24■□□□□ 0.35
C9orf78-201ENST00000372447 MEIS3P2A8K0S8 358 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 F8VZ95 297 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 SRGAP2O75044 1071 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 AMHP03971 560 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 MCF2P10911 925 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 HARSP12081 509 aaKnown RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 SOX5P35711 763 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 MCCD1P59942 119 aaPredicted RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 CETN1Q12798 172 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 NAB2Q15742 525 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 DCAF4L1Q3SXM0 396 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 SEZ6Q53EL9 994 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 MRPL10Q7Z7H8 261 aaKnown RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 LMO3Q8TAP4 145 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 POMGNT1Q8WZA1 660 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 LPPQ93052 612 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 RNPC3Q96LT9 517 aaKnown RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 MSTO1Q9BUK6 570 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 PARD6BQ9BYG5 372 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 PRO3102Q9H379 93 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 SLC4A7Q9Y6M7 1214 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 TTC3P53804 2025 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 UPP2O95045 317 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 EOMESO95936 686 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 SKIP12755 728 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 RFX1P22670 979 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 OSTNP61366 133 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 PPP3CAQ08209 521 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 DRAP1Q14919 205 aaPredicted RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 C1orf220Q5T0J3 134 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 VPS36Q86VN1 386 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 FMNL3Q8IVF7 1028 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 TMEM192Q8IY95 271 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 THNSL1Q8IYQ7 743 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 RNF169Q8NCN4 708 aa17.23■□□□□ 0.35
C9orf78-201ENST00000372447 MTIF3Q9H2K0 278 aaKnown RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 ELAC1Q9H777 363 aaKnown RBP17.23■□□□□ 0.35
C9orf78-201ENST00000372447 TMEM161AQ9NX61 479 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms