RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 FRMD3A2A2Y4 597 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 BTNL10A8MVZ5 291 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 POC1B-GALNT4F8VUJ3 575 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 PDHXO00330 501 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 IRF6O14896 467 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SGPL1O95470 568 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ITIH2P19823 946 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ATICP31939 592 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 MSH2P43246 934 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 FNTAP49354 379 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ZNF131P52739 623 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 NCKAP1LP55160 1127 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 NLRP11P59045 1033 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 KCNMA1Q12791 1236 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 IFT88Q13099 833 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ITGB3BPQ13352 177 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 TRIP13Q15645 432 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM139Q8IV31 216 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 CCDC60Q8IWA6 550 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 TMEM161BQ8NDZ6 487 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 SHCBP1Q8NEM2 672 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 REPS2Q8NFH8 660 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 MGARPQ8TDB4 240 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 PYROXD1Q8WU10 500 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 FHDC1Q9C0D6 1143 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 GANQ9H2C0 597 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ABHD16BQ9H3Z7 469 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ST6GALNAC4Q9H4F1 302 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 CYP3A43Q9HB55 503 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 COX16Q9P0S2 106 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 MAD1L1Q9Y6D9 718 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 MYH13Q9UKX3 1938 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 DDX60Q8IY21 1712 aaKnown RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 NHSQ6T4R5 1651 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 AKAP11Q9UKA4 1901 aa5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 ASTN2O75129 1339 aaPredicted RBP5.63□□□□□ -1.51
SMNDC1-202ENST00000369603 H3BQF6 201 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ACKR2O00590 384 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PSTPIP1O43586 416 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SASH3O75995 380 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CPP00450 1065 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 MCF2P10911 925 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 GARSP41250 739 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CLCN3P51790 818 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 MXRA7P84157 204 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TSPY1Q01534 308 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CENPCQ03188 943 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 KCNA1Q09470 495 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CDO1Q16878 200 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ZCWPW2Q504Y3 356 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 NOL9Q5SY16 702 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BSPRYQ5W0U4 402 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 GPAT2Q6NUI2 795 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SLC51AQ86UW1 340 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 VSIG1Q86XK7 387 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BRSK2Q8IWQ3 736 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 HPDLQ96IR7 371 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 VCPIP1Q96JH7 1222 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PACSIN1Q9BY11 444 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 BAIAP2L1Q9UHR4 511 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SNX9Q9Y5X1 595 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 H3BRB1 525 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 FZD9O00144 591 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TTI1O43156 1089 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TGFB1I1O43294 461 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 RAD51CO43502 376 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 KPNA6O60684 536 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 KRT14P02533 472 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 C6orf222P0C671 652 aaPredicted RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 RASSF2P50749 326 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 FKBP1BP68106 108 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 KRT17Q04695 432 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PDCLQ13371 301 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 LY6KQ17RY6 165 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SPOUT1Q5T280 376 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CAPN12Q6ZSI9 719 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PLPPR4Q7Z2D5 763 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TRIM42Q8IWZ5 723 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CCNYQ8ND76 341 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 APPL2Q8NEU8 664 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 CLEC4DQ8WXI8 215 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ATP6V1G3Q96LB4 118 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ERP44Q9BS26 406 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TRAIPQ9BWF2 469 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 OSBPL8Q9BZF1 889 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 TUT1Q9H6E5 874 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SEPT10Q9P0V9 454 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 RAB21Q9UL25 225 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 UBQLN1Q9UMX0 589 aaKnown RBP5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 PCDHGC5Q9Y5F6 944 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SPDYE5A6NIY4 337 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SMAPO00193 183 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 NFKBIEO00221 500 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 DDX3XO00571 662 aaKnown RBP eCLIP5.62□□□□□ -1.511e-9■□□□□ 9.8
SMNDC1-202ENST00000369603 ATP9AO75110 1047 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 SUN1O94901 812 aa5.62□□□□□ -1.51
SMNDC1-202ENST00000369603 ACSL3O95573 720 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms