RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 SLC39A4Q6P5W5 647 aa13.7□□□□□ -0.22
CHD1L-202ENST00000369258 WNK4Q96J92 1243 aa13.7□□□□□ -0.22
CHD1L-202ENST00000369258 ZBTB45Q96K62 511 aaPredicted RBP13.7□□□□□ -0.22
CHD1L-202ENST00000369258 MAGEB18Q96M61 343 aa13.7□□□□□ -0.22
CHD1L-202ENST00000369258 RBM15Q96T37 977 aaKnown RBP eCLIP13.7□□□□□ -0.223e-6■■□□□ 11.8
CHD1L-202ENST00000369258 SLC5A4Q9NY91 659 aa13.7□□□□□ -0.22
CHD1L-202ENST00000369258 PTPRJQ12913 1337 aa13.7□□□□□ -0.22
CHD1L-202ENST00000369258 TAC1P20366 129 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 EPHB2P29323 1055 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 HOXA10P31260 410 aaPredicted RBP13.69□□□□□ -0.22
CHD1L-202ENST00000369258 STRN3Q13033 797 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 SMTNL2Q2TAL5 461 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 ANKRD20A2Q5SQ80 823 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 ANKRD20A1Q5TYW2 823 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 ANKRD20A3Q5VUR7 823 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 MIS18BP1Q6P0N0 1132 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 RHBDF2Q6PJF5 856 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 VSIG1Q86XK7 387 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 DDX1Q92499 740 aaKnown RBP13.69□□□□□ -0.22
CHD1L-202ENST00000369258 RAB3IPQ96QF0 476 aaPredicted RBP13.69□□□□□ -0.22
CHD1L-202ENST00000369258 CCDC77Q9BR77 488 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 GTF3C4Q9UKN8 822 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 DNPEPQ9ULA0 475 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 BPTFQ12830 3046 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 C10orf71Q711Q0 1435 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 FSCN2O14926 492 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 CYP1A2P05177 515 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 KRT15P19012 456 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 PLCB3Q01970 1234 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 MTFR1Q15390 333 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 RNF43Q68DV7 783 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 CAPRIN2Q6IMN6 1127 aaKnown RBP13.69□□□□□ -0.22
CHD1L-202ENST00000369258 PPP1R21Q6ZMI0 780 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 PARD3BQ8TEW8 1205 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 TAAR1Q96RJ0 339 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 KIAA1683Q9H0B3 1180 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 UVRAGQ9P2Y5 699 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 SIPA1L1O43166 1804 aa13.69□□□□□ -0.22
CHD1L-202ENST00000369258 EME2A4GXA9 379 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-202ENST00000369258 UNC5CO95185 931 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 MAP3K6O95382 1288 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 FDX1P10109 184 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 IL9RQ01113 521 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 ORC1Q13415 861 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 SETDB1Q15047 1291 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 SLC1A5Q15758 541 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 VPS72Q15906 364 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 KCNT1Q5JUK3 1230 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 SHC3Q92529 594 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 ZNF516Q92618 1163 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 BICD1Q96G01 975 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 GMCL1Q96IK5 515 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 VPS37BQ9H9H4 285 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 TXLNGQ9NUQ3 528 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 HNRNPDLO14979 420 aaKnown RBP13.68□□□□□ -0.22
CHD1L-202ENST00000369258 P4HA2O15460 535 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 DHX15O43143 795 aaKnown RBP13.68□□□□□ -0.22
CHD1L-202ENST00000369258 CDH16O75309 829 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 CCNE2O96020 404 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 ABL2P42684 1182 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 MYBPC2Q14324 1141 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 TAF11Q15544 211 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 SLCO2A1Q92959 643 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 CNKSR1Q969H4 720 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 GRAMD1AQ96CP6 724 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 TMEM121Q9BTD3 319 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 TRAIPQ9BWF2 469 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 STRA6Q9BX79 667 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 DCLK3Q9C098 648 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 YIPF3Q9GZM5 350 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 RAB20Q9NX57 234 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 CHKBQ9Y259 395 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 EXOC1LA0A1B0GW35 172 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 PPP1R12AO14974 1030 aaPredicted RBP13.68□□□□□ -0.22
CHD1L-202ENST00000369258 VIL1P09327 827 aaKnown RBP13.68□□□□□ -0.22
CHD1L-202ENST00000369258 NPTX2P47972 431 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 CDR2Q01850 454 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 ZNF365Q70YC5 407 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 GRK7Q8WTQ7 553 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 ACCSQ96QU6 501 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 MOV10L1Q9BXT6 1211 aaKnown RBP13.68□□□□□ -0.22
CHD1L-202ENST00000369258 KCND2Q9NZV8 630 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 SPATA31A6Q5VVP1 1343 aa13.68□□□□□ -0.22
CHD1L-202ENST00000369258 CCNB1P14635 433 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 TNNI1P19237 187 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 MAN1A1P33908 653 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 SKIV2L2P42285 1042 aaKnown RBP13.67□□□□□ -0.22
CHD1L-202ENST00000369258 TUBP50607 506 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 MFAP3P55082 362 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 CAV1Q03135 178 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 PTK6Q13882 451 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 RFWD3Q6PCD5 774 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 TMEM270Q6UE05 265 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 SEPT12Q8IYM1 358 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 ZBED8Q8IZ13 594 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 ANKRD35Q8N283 1001 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 C7orf43Q8WVR3 580 aa13.67□□□□□ -0.22
CHD1L-202ENST00000369258 NPHS2Q9NP85 383 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms