RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 MCAMP43121 646 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 GZMKP49863 264 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 MXRA7P84157 204 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 FAM102BQ5T8I3 360 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 SH2D3CQ8N5H7 860 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 IL17RAQ96F46 866 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 UHRF1Q96T88 793 aaPredicted RBP4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 ADAM2Q99965 735 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 SPON1Q9HCB6 807 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 ANLNQ9NQW6 1124 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 GPRC5DQ9NZD1 345 aa4.53□□□□□ -1.68
ECHDC1-201ENST00000368287 MAST3O60307 1309 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 SALL3Q9BXA9 1300 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 E2F8A0AVK6 867 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 WDR91A4D1P6 747 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 ITGA10O75578 1167 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 RFPL1O75677 317 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 C1QL1O75973 258 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 ENDOD1O94919 500 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 IL33O95760 270 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 PTPN7P35236 360 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 SIM1P81133 766 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 APBA1Q02410 837 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 MRPL49Q13405 166 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 ZNF169Q14929 603 aaPredicted RBP4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 MLC1Q15049 377 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 PDCD4Q53EL6 469 aaKnown RBP4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 ZNF425Q6IV72 752 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 CATIPQ7Z7H3 387 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 XYLT1Q86Y38 959 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 TCEAL8Q8IYN2 117 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 MYO1HQ8N1T3 1032 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 MIER2Q8N344 545 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 OR2I1PQ8NGU4 316 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 HSPBAP1Q96EW2 488 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 LRGUKQ96M69 825 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 C7orf25Q9BPX7 421 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 BCO1Q9HAY6 547 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 SCOCQ9UIL1 159 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 INTUQ9ULD6 942 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 MAP3K2Q9Y2U5 619 aa4.52□□□□□ -1.69
ECHDC1-201ENST00000368287 CGB1A6NKQ9 187 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 RPLP2P05387 115 aaKnown RBP4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 CT47B1P0C2W7 299 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 VCAM1P19320 739 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 EDNRBP24530 442 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 KIF23Q02241 960 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 PPP3CAQ08209 521 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 MGAT2Q10469 447 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 ZNF267Q14586 743 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 MIGA2Q7L4E1 593 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 EPM2AIP1Q7L775 607 aaPredicted RBP4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 PQLC1Q8N2U9 271 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 MAGEB6Q8N7X4 407 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 OR7D4Q8NG98 312 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 TTC8Q8TAM2 541 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 NRG4Q8WWG1 115 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 HDAC10Q969S8 669 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 CYFIP2Q96F07 1278 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 CAMKK2Q96RR4 588 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 MANSC1Q9H8J5 431 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 LIMCH1Q9UPQ0 1083 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 ANKRD6Q9Y2G4 727 aa4.51□□□□□ -1.69
ECHDC1-201ENST00000368287 MGST3O14880 152 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 KCNAB3O43448 404 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 PROP1O75360 226 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 MYBP10242 640 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 IL2RBP14784 551 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 LPOP22079 712 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 FDXRP22570 491 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 WASP42768 502 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 RARRES1P49788 294 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 CACNA2D1P54289 1103 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 ADKP55263 362 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 RESTQ13127 1097 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 MST1LQ2TV78 715 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 C3orf36Q3SXR2 165 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 RRP12Q5JTH9 1297 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 NXNQ6DKJ4 435 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 PPP4R3AQ6IN85 833 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 OR10H5Q8NGA6 315 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 MDM1Q8TC05 714 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 DPF2Q92785 391 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 COA7Q96BR5 231 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 GTPBP4Q9BZE4 634 aaKnown RBP4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 SENP6Q9GZR1 1112 aaPredicted RBP4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 SLC12A5Q9H2X9 1139 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 TMEM140Q9NV12 185 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 GABBR1Q9UBS5 961 aa4.5□□□□□ -1.69
ECHDC1-201ENST00000368287 HTRA2O43464 458 aaPredicted RBP4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 ATF3P18847 181 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 SEPT2Q15019 361 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 UAP1L1Q3KQV9 507 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 HSP90AB2PQ58FF8 381 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 FAM47AQ5JRC9 791 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 LCE1EQ5T753 118 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 ARMC6Q6NXE6 501 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 Q6ZVL8 140 aa4.49□□□□□ -1.69
ECHDC1-201ENST00000368287 NOL8Q76FK4 1167 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms