RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 NELFCDQ8IXH7 590 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 RHOT2Q8IXI1 618 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 OLIG1Q8TAK6 271 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 PPP1R13LQ8WUF5 828 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 SLC35C1Q96A29 364 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 MAGOHBQ96A72 148 aaKnown RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 BORCS6Q96GS4 357 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 FAM20AQ96MK3 541 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 ZNF317Q96PQ6 595 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 PLCD4Q9BRC7 762 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 ERP44Q9BS26 406 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 POLR3CQ9BUI4 534 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 ROPN1BQ9BZX4 212 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 UBA5Q9GZZ9 404 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 CPVLQ9H3G5 476 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 ROPN1Q9HAT0 212 aaPredicted RBP12.34□□□□□ -0.43
USF1-201ENST00000368019 VAT1LQ9HCJ6 419 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 ZDHHC18Q9NUE0 388 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 SEL1LQ9UBV2 794 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 BRWD1Q9NSI6 2320 aa12.34□□□□□ -0.43
USF1-201ENST00000368019 A0A1B0GUA9 196 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 ZBBXA8MT70 800 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 TTI1O43156 1089 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 PHF2O75151 1096 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 MTA2O94776 668 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 FOSP01100 380 aaPredicted RBP12.33□□□□□ -0.44
USF1-201ENST00000368019 NR3C1P04150 777 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 ELF1P32519 619 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 CIITAP33076 1130 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 GALCP54803 685 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 MRPS5P82675 430 aaKnown RBP12.33□□□□□ -0.44
USF1-201ENST00000368019 SPIRE1Q08AE8 756 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 CYP1B1Q16678 543 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 ARSHQ5FYA8 562 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 CPLX4Q7Z7G2 160 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 ADGRF4Q8IZF3 695 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 HVCN1Q96D96 273 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 MPHOSPH6Q99547 160 aaKnown RBP12.33□□□□□ -0.44
USF1-201ENST00000368019 FGFBP2Q9BYJ0 223 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 ANO3Q9BYT9 981 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 PSTPIP2Q9H939 334 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 COL20A1Q9P218 1284 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 MTRF1LQ9UGC7 380 aaKnown RBP12.33□□□□□ -0.44
USF1-201ENST00000368019 PCYOX1Q9UHG3 505 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 AMACRQ9UHK6 382 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 SLC12A4Q9UP95 1085 aa12.33□□□□□ -0.44
USF1-201ENST00000368019 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 EYA4O95677 639 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 SSBP05455 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
USF1-201ENST00000368019 PSMC2P35998 433 aaKnown RBP12.32□□□□□ -0.44
USF1-201ENST00000368019 ZNF131P52739 623 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 PMS2P54278 862 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 SLC8A3P57103 927 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 DR1Q01658 176 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 ARID5AQ03989 594 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 ARHGAP1Q07960 439 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 CRYMQ14894 314 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 GPNMBQ14956 572 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 QPCTQ16769 361 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 USH1GQ495M9 461 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 FAM47CQ5HY64 1035 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 DENND2CQ68D51 928 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 STXBP4Q6ZWJ1 553 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 CYFIP1Q7L576 1253 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 DAAM2Q86T65 1068 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 SESTD1Q86VW0 696 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 GBP7Q8N8V2 638 aaPredicted RBP12.32□□□□□ -0.44
USF1-201ENST00000368019 LNX1Q8TBB1 728 aaPredicted RBP12.32□□□□□ -0.44
USF1-201ENST00000368019 PHOSPHO2Q8TCD6 241 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 SYTL5Q8TDW5 730 aaPredicted RBP12.32□□□□□ -0.44
USF1-201ENST00000368019 TMEM174Q8WUU8 243 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 CTNNBL1Q8WYA6 563 aaPredicted RBP12.32□□□□□ -0.44
USF1-201ENST00000368019 TAAR1Q96RJ0 339 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 RPS6KC1Q96S38 1066 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 SLC9A7Q96T83 725 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 JPH2Q9BR39 696 aaPredicted RBP12.32□□□□□ -0.44
USF1-201ENST00000368019 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 ODF2LQ9ULJ1 636 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 DNM3Q9UQ16 869 aa12.32□□□□□ -0.44
USF1-201ENST00000368019 KIAA0391O15091 583 aaKnown RBP12.31□□□□□ -0.44
USF1-201ENST00000368019 P4HA2O15460 535 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 PPP1R11O60927 126 aaPredicted RBP12.31□□□□□ -0.44
USF1-201ENST00000368019 MED24O75448 989 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 AKAP3O75969 853 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 ARHGEF15O94989 841 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 CA3P07451 260 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 ACTN1P12814 892 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 ATP5DP30049 168 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 HOXD13P35453 343 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 DNA2P51530 1060 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 MAPK7Q13164 816 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 BFSP2Q13515 415 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 TAOK1Q7L7X3 1001 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 SFR1Q86XK3 245 aa12.31□□□□□ -0.44
USF1-201ENST00000368019 DDX42Q86XP3 938 aaKnown RBP eCLIP12.31□□□□□ -0.44
USF1-201ENST00000368019 C12orf50Q8NA57 414 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms