RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 SKIDA1Q1XH10 827 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 THAP12O43422 761 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 PPFIA2O75334 1257 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 ASS1P00966 412 aaKnown RBP21.4■■□□□ 1.02
CHD1L-201ENST00000361293 YBX3P16989 372 aaKnown RBP eCLIP21.4■■□□□ 1.021e-6■□□□□ 11
CHD1L-201ENST00000361293 TBXAS1P24557 533 aaPredicted RBP21.4■■□□□ 1.02
CHD1L-201ENST00000361293 COILP38432 576 aaPredicted RBP21.4■■□□□ 1.02
CHD1L-201ENST00000361293 MYL6P60660 151 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 MAPK6Q16659 721 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 GJC2Q5T442 439 aaPredicted RBP21.4■■□□□ 1.02
CHD1L-201ENST00000361293 C9orf131Q5VYM1 1079 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 MMS22LQ6ZRQ5 1243 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 CEP120Q8N960 986 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 NLRP4Q96MN2 994 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 MGAMO43451 1857 aa21.4■■□□□ 1.02
CHD1L-201ENST00000361293 MYBL1P10243 752 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 NR1D1P20393 614 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 CLCN3P51790 818 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 OSTNP61366 133 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 MTMR3Q13615 1198 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 MXD4Q14582 209 aaPredicted RBP21.39■■□□□ 1.02
CHD1L-201ENST00000361293 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.39■■□□□ 1.02
CHD1L-201ENST00000361293 PLPPR4Q7Z2D5 763 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 WDR49Q8IV35 697 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 CCDC105Q8IYK2 499 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 UBR7Q8N806 425 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 C1orf54Q8WWF1 131 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 EPB41L4BQ9H329 900 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 ADAM22Q9P0K1 906 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 RASAL2Q9UJF2 1139 aa21.39■■□□□ 1.02
CHD1L-201ENST00000361293 EVPLQ92817 2033 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 OGTO15294 1046 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 TXNP10599 105 aaKnown RBP21.39■■□□□ 1.01
CHD1L-201ENST00000361293 CYP2C8P10632 490 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 CD58P19256 250 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 PPARDQ03181 441 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 PTP4A2Q12974 167 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 UBAP2Q5T6F2 1119 aaKnown RBP21.39■■□□□ 1.01
CHD1L-201ENST00000361293 KDM7AQ6ZMT4 941 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 TMEM130Q8N3G9 435 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 TCP11Q8WWU5 503 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 MINDY3Q9H8M7 445 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 EFCC1Q9HA90 598 aa21.39■■□□□ 1.01
CHD1L-201ENST00000361293 CPSF3Q9UKF6 684 aaKnown RBP21.39■■□□□ 1.01
CHD1L-201ENST00000361293 EIF3HO15372 352 aaKnown RBP eCLIP21.38■■□□□ 1.011e-6■■■■□ 23.8
CHD1L-201ENST00000361293 IVLP07476 585 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 MYZAPP0CAP1 466 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 ZNF132P52740 706 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 DRG2P55039 364 aaKnown RBP21.38■■□□□ 1.01
CHD1L-201ENST00000361293 MCL1Q07820 350 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 MAMLD1Q13495 774 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 ZNF394Q53GI3 561 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 ZBTB8OSQ8IWT0 167 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 THNSL1Q8IYQ7 743 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 C1orf131Q8NDD1 294 aaKnown RBP21.38■■□□□ 1.01
CHD1L-201ENST00000361293 ZNF606Q8WXB4 792 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 TRIM11Q96F44 468 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 DDX27Q96GQ7 796 aaKnown RBP21.38■■□□□ 1.01
CHD1L-201ENST00000361293 MPHOSPH6Q99547 160 aaKnown RBP21.38■■□□□ 1.01
CHD1L-201ENST00000361293 MTUS1Q9ULD2 1270 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 HMGB1P1B2RPK0 211 aaPredicted RBP21.38■■□□□ 1.01
CHD1L-201ENST00000361293 GUCY1A3Q02108 690 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 EEF1DP3Q658K8 133 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 KCNV1Q6PIU1 500 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 ATG4AQ8WYN0 398 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 IMPG2Q9BZV3 1241 aa21.38■■□□□ 1.01
CHD1L-201ENST00000361293 FSCN2O14926 492 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 HOXC6P09630 235 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 IQCF3P0C7M6 154 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 TAS2R40P59535 323 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 EFCAB13Q8IY85 973 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 RNPEPQ9H4A4 650 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 PPME1Q9Y570 386 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 GOLGA6L10A6NI86 522 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 INO80B-WBP1J3KQ70 363 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 PROSCO94903 275 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 HPDP32754 393 aaPredicted RBP21.37■■□□□ 1.01
CHD1L-201ENST00000361293 SNX1Q13596 522 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 TRIM72Q6ZMU5 477 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 PHF13Q86YI8 300 aaPredicted RBP21.37■■□□□ 1.01
CHD1L-201ENST00000361293 TMEM192Q8IY95 271 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 C12orf50Q8NA57 414 aaPredicted RBP21.37■■□□□ 1.01
CHD1L-201ENST00000361293 INO80BQ9C086 356 aaPredicted RBP21.37■■□□□ 1.01
CHD1L-201ENST00000361293 SPON1Q9HCB6 807 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 PTPRHQ9HD43 1115 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 CHST7Q9NS84 486 aa21.37■■□□□ 1.01
CHD1L-201ENST00000361293 PODXLO00592 558 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 GAS2O43903 313 aaKnown RBP21.36■■□□□ 1.01
CHD1L-201ENST00000361293 PPFIA4O75335 1185 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 CSDE1O75534 798 aaKnown RBP21.36■■□□□ 1.01
CHD1L-201ENST00000361293 OSBPP22059 807 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 PROZP22891 400 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 TFAMQ00059 246 aaKnown RBP21.36■■□□□ 1.01
CHD1L-201ENST00000361293 EFCAB12Q6NXP0 572 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 SCARA5Q6ZMJ2 495 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 PKNOX2Q96KN3 472 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 LRRC19Q9H756 370 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 CWC15Q9P013 229 aaKnown RBP21.36■■□□□ 1.01
CHD1L-201ENST00000361293 RSPH14Q9UHP6 348 aa21.36■■□□□ 1.01
CHD1L-201ENST00000361293 DCDC2CA8MYV0 355 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms