RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 ABCC4O15439 1325 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 HSF2BPO75031 334 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CNOT3O75175 753 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 NTSR2O95665 410 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CALM1P0DP23 149 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CALM2P0DP24 149 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CALM3P0DP25 149 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 TBXAS1P24557 533 aaPredicted RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 RGS2P41220 211 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CDK7P50613 346 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 IST1P53990 364 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 GSTO1P78417 241 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 SP3Q02447 781 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 RELQ04864 619 aaPredicted RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 GOLGA8FQ08AF8 430 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 GOLGA8DPQ0D2H9 430 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 METTL2BQ6P1Q9 378 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 ZNF704Q6ZNC4 412 aaPredicted RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 DBX2Q6ZNG2 339 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 MARK2Q7KZI7 788 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 ELMOD1Q8N336 334 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 PLEKHO2Q8TD55 490 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 SLC39A13Q96H72 371 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 TTC25Q96NG3 672 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 NIFKQ9BYG3 293 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 MRPL44Q9H9J2 332 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 SIAEQ9HAT2 523 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 ANO2Q9NQ90 1003 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 UCKL1Q9NWZ5 548 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 HERC5Q9UII4 1024 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 SCAF8Q9UPN6 1271 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 COL4A1P02462 1669 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 SH3PXD2BA1X283 911 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 XPOTO43592 962 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 KRT10P13645 584 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 RXRAP19793 462 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 KPNB1Q14974 876 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 LETM2Q2VYF4 491 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CLVS2Q5SYC1 327 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 OLFM4Q6UX06 510 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 TRPM8Q7Z2W7 1104 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 ZC3H18Q86VM9 953 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 CAGE1Q8TC20 777 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 SH3RF3Q8TEJ3 882 aaPredicted RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 GIPC3Q8TF64 312 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 IFT74Q96LB3 600 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 DDX50Q9BQ39 737 aaKnown RBP9.17□□□□□ -0.94
RFX4-202ENST00000357881 ZBED2Q9BTP6 218 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 CRISPLD2Q9H0B8 497 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 ADNPQ9H2P0 1102 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 ZNF287Q9HBT7 754 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 EHD2Q9NZN4 543 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 EDARQ9UNE0 448 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 TMEM5Q9Y2B1 443 aa9.17□□□□□ -0.94
RFX4-202ENST00000357881 SIGLEC16A6NMB1 481 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 YDJCA8MPS7 323 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 GOLGA8BA8MQT2 603 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 BACH1O14867 736 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 IFIT3O14879 490 aaKnown RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 ZBTB11O95625 1053 aaPredicted RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 HLA-DRAP01903 254 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 ZCCHC18P0CG32 403 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 PSMC2P35998 433 aaKnown RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 SLC1A1P43005 524 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 SEMA3AQ14563 771 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 RFTN1Q14699 578 aaPredicted RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 MFSD10Q14728 455 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 MTHFSDQ2M296 383 aaKnown RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 SLC9C1Q4G0N8 1177 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 SPECC1LQ69YQ0 1117 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 SYTL1Q8IYJ3 562 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 CPSF7Q8N684 471 aaKnown RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 CCDC197Q8NCU1 140 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 NOC3LQ8WTT2 800 aaKnown RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 PIP5K1AQ99755 562 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 DESI2Q9BSY9 194 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 RNF41Q9H4P4 317 aaPredicted RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 NMRK1Q9NWW6 199 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 AGO2Q9UKV8 859 aaKnown RBP9.16□□□□□ -0.94
RFX4-202ENST00000357881 RABGAP1Q9Y3P9 1069 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 SNX5Q9Y5X3 404 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 SYCE1LA8MT33 242 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 HMOX1P09601 288 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 RARAP10276 462 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 M6PRP20645 277 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 BCAP31P51572 246 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 KRT85P78386 507 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 SPDYAQ5MJ70 313 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 CACNA2D4Q7Z3S7 1137 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 DDX42Q86XP3 938 aaKnown RBP eCLIP9.16□□□□□ -0.94
RFX4-202ENST00000357881 KIF2BQ8N4N8 673 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 NLRP7Q8WX94 980 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 IQCDQ96DY2 449 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 NRBF2Q96F24 287 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 VPS35Q96QK1 796 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 WNT8AQ9H1J5 351 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 GHITMQ9H3K2 345 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 LZTFL1Q9NQ48 299 aa9.16□□□□□ -0.94
RFX4-202ENST00000357881 DDX18Q9NVP1 670 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms