RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 EDN1P05305 212 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 ITIH2P19823 946 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 NOP14P78316 857 aaKnown RBP23.57■■□□□ 1.36
UPF3A-201ENST00000351487 FSTL1Q12841 308 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 KLF1Q13351 362 aaPredicted RBP23.57■■□□□ 1.36
UPF3A-201ENST00000351487 PLEKHA7Q6IQ23 1121 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 MFSD5Q6N075 450 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 LLGL2Q6P1M3 1020 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 TMEM270Q6UE05 265 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 STMN4Q9H169 189 aaPredicted RBP23.57■■□□□ 1.36
UPF3A-201ENST00000351487 AAASQ9NRG9 546 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 ANKFY1Q9P2R3 1169 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 LRRC37A2A6NM11 1700 aa23.57■■□□□ 1.36
UPF3A-201ENST00000351487 UBA1P22314 1058 aaKnown RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 IVDP26440 423 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 ALDH5A1P51649 535 aaPredicted RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 CNTN2Q02246 1040 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 RBBP8NLQ8NC74 664 aaPredicted RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 SNF8Q96H20 258 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 C11orf70Q9BRQ4 267 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 ROPN1BQ9BZX4 212 aaPredicted RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 ROPN1Q9HAT0 212 aaPredicted RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 DDX20Q9UHI6 824 aaKnown RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 SCINQ9Y6U3 715 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 FARP2O94887 1054 aaPredicted RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 FSBPO95073 299 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 ZBTB7AO95365 584 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 GAS8O95995 478 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 POTEJP0CG39 1038 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 MAMLD1Q13495 774 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 QPCTQ16769 361 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 C2CD6Q53TS8 623 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 RHOT1Q8IXI2 618 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 EPS8L3Q8TE67 593 aaKnown RBP23.56■■□□□ 1.36
UPF3A-201ENST00000351487 PCYT2Q99447 389 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 HOMER3Q9NSC5 361 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 ADAM22Q9P0K1 906 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 ASIC3Q9UHC3 531 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 NUB1Q9Y5A7 615 aa23.56■■□□□ 1.36
UPF3A-201ENST00000351487 TLDC2A0PJX2 215 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 CFHP08603 1231 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 C1QBPQ07021 282 aaKnown RBP23.55■■□□□ 1.36
UPF3A-201ENST00000351487 SNX1Q13596 522 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 CAPSQ13938 189 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 LLGL1Q15334 1064 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 SEPT14Q6ZU15 432 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 ANKRD35Q8N283 1001 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 OR5B17Q8NGF7 314 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 MDM1Q8TC05 714 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 ATG4AQ8WYN0 398 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 CDC42EP4Q9H3Q1 356 aaKnown RBP23.55■■□□□ 1.36
UPF3A-201ENST00000351487 GSTTP1A0A1W2PQM5 241 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 RASGRF2O14827 1237 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 ADCY3O60266 1144 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 ZNF132P52740 706 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 ZPBP2Q6X784 338 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 PHLDB2Q86SQ0 1253 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 KATNAL2Q8IYT4 538 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 UBR7Q8N806 425 aa23.55■■□□□ 1.36
UPF3A-201ENST00000351487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.55■■□□□ 1.36
UPF3A-201ENST00000351487 CHN1P15882 459 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 EDNRBP24530 442 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 IFI35P80217 286 aaPredicted RBP23.54■■□□□ 1.36
UPF3A-201ENST00000351487 CAV1Q03135 178 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 PPARDQ03181 441 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 AUHQ13825 339 aaKnown RBP23.54■■□□□ 1.36
UPF3A-201ENST00000351487 LBX2Q6XYB7 198 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 PASD1Q8IV76 773 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 BRSK2Q8IWQ3 736 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 ATL2Q8NHH9 583 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 ATXN2LQ8WWM7 1075 aaKnown RBP23.54■■□□□ 1.36
UPF3A-201ENST00000351487 GGA3Q9NZ52 723 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 NEU2Q9Y3R4 380 aa23.54■■□□□ 1.36
UPF3A-201ENST00000351487 DRD4P21917 467 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 AP3M2P53677 418 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 DRP2Q13474 957 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 NCOA4Q13772 614 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 CHMP6Q96FZ7 201 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 NRBP2Q9NSY0 501 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 SMIM23A6NLE4 172 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 RALAP11233 206 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 IFT88Q13099 833 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 GRM1Q13255 1194 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 CCDC25Q86WR0 208 aa23.53■■□□□ 1.36
UPF3A-201ENST00000351487 R3HDM2Q9Y2K5 976 aaKnown RBP23.53■■□□□ 1.36
UPF3A-201ENST00000351487 O00370 1275 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 FAM189A1O60320 539 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 TAS2R40P59535 323 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 CCNG2Q16589 344 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 MMS22LQ6ZRQ5 1243 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 EXD1Q8NHP7 514 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 SEC16BQ96JE7 1060 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 ZNF317Q96PQ6 595 aaPredicted RBP23.52■■□□□ 1.36
UPF3A-201ENST00000351487 SELENOSQ9BQE4 189 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 CCDC134Q9H6E4 229 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 PPME1Q9Y570 386 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 THAP12O43422 761 aa23.52■■□□□ 1.36
UPF3A-201ENST00000351487 MAFO75444 373 aaPredicted RBP23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms