RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 IFT88Q13099 833 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 RBBP8NLQ8NC74 664 aaPredicted RBP22.8■■□□□ 1.24
CCDC38-201ENST00000344280 DNERQ8NFT8 737 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 KAT2BQ92831 832 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 CGRRF1Q99675 332 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 PLVAPQ9BX97 442 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 NIFKQ9BYG3 293 aaKnown RBP22.8■■□□□ 1.24
CCDC38-201ENST00000344280 ADAM22Q9P0K1 906 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 ASIC3Q9UHC3 531 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 RGS16O15492 202 aaPredicted RBP22.8■■□□□ 1.24
CCDC38-201ENST00000344280 CST3P01034 146 aaPredicted RBP22.8■■□□□ 1.24
CCDC38-201ENST00000344280 SLC1A1P43005 524 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 CALCOCO2Q13137 446 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 SLMAPQ14BN4 828 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 EEPD1Q7L9B9 569 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 DCLK3Q9C098 648 aa22.8■■□□□ 1.24
CCDC38-201ENST00000344280 DNAJC17Q9NVM6 304 aaKnown RBP22.8■■□□□ 1.24
CCDC38-201ENST00000344280 CHN1P15882 459 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 ABCD1P33897 745 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 PTP4A2Q12974 167 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 TARBP2Q15633 366 aaKnown RBP22.79■■□□□ 1.24
CCDC38-201ENST00000344280 ZNF568Q3ZCX4 644 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 SLFN12LQ6IEE8 588 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 CCDC50Q8IVM0 306 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 SELENOSQ9BQE4 189 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 CDC42EP4Q9H3Q1 356 aaKnown RBP22.79■■□□□ 1.24
CCDC38-201ENST00000344280 THAP12O43422 761 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 CPP00450 1065 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 GJC1P36383 396 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 MMP13P45452 471 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 TTC31Q49AM3 519 aaPredicted RBP22.79■■□□□ 1.24
CCDC38-201ENST00000344280 ERMARDQ5T6L9 678 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 C6orf89Q6UWU4 347 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.79■■□□□ 1.24
CCDC38-201ENST00000344280 TRIM11Q96F44 468 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 PWWP2AQ96N64 755 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 USTQ9Y2C2 406 aa22.79■■□□□ 1.24
CCDC38-201ENST00000344280 ATXN2Q99700 1313 aaKnown RBP22.79■■□□□ 1.24
CCDC38-201ENST00000344280 SIP14410 1827 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 KIAA0754O94854 1291 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 ACSL3O95573 720 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 VPS41P49754 854 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 KLF1Q13351 362 aaPredicted RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 NCOA4Q13772 614 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 RHBDF2Q6PJF5 856 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 ZBTB33Q86T24 672 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 SPATS2Q86XZ4 545 aaKnown RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 OTUD6BQ8N6M0 293 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 CHST13Q8NET6 341 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 KCNN1Q92952 543 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 XPO6Q96QU8 1125 aaKnown RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 CNOT10Q9H9A5 744 aaKnown RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 WHRNQ9P202 907 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 SOWAHBA6NEL2 793 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 USP2O75604 605 aaPredicted RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 TCF4P15884 667 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 CD58P19256 250 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 AUHQ13825 339 aaKnown RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 CCDC38Q502W7 563 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 LBX2Q6XYB7 198 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 PRUNE1Q86TP1 453 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 KLHL11Q9NVR0 708 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 KCNG1Q9UIX4 513 aa22.78■■□□□ 1.24
CCDC38-201ENST00000344280 POLR2AP24928 1970 aaKnown RBP22.78■■□□□ 1.24
CCDC38-201ENST00000344280 ADCY3O60266 1144 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 LDHAP00338 332 aaKnown RBP22.77■■□□□ 1.24
CCDC38-201ENST00000344280 RPL7AP62424 266 aaKnown RBP22.77■■□□□ 1.24
CCDC38-201ENST00000344280 ADCY2Q08462 1091 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 VGLL4Q14135 290 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 ATP13A4Q4VNC1 1196 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 NOL9Q5SY16 702 aaKnown RBP22.77■■□□□ 1.24
CCDC38-201ENST00000344280 C6orf118Q5T5N4 469 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 PRPF31Q8WWY3 499 aaKnown RBP22.77■■□□□ 1.24
CCDC38-201ENST00000344280 CCDC114Q96M63 670 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 CNTN6Q9UQ52 1028 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.77■■□□□ 1.24
CCDC38-201ENST00000344280 SNCAIPQ9Y6H5 919 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 LOC285556D6RIA3 1793 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 LTBP3Q9NS15 1303 aa22.77■■□□□ 1.24
CCDC38-201ENST00000344280 RASGRF2O14827 1237 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 FAM189A1O60320 539 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 STAT5BP51692 787 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 ITGA8P53708 1063 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 LONRF1Q17RB8 773 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 LY6KQ17RY6 165 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 SH3D19Q5HYK7 790 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 RNF187Q5TA31 235 aaPredicted RBP22.77■■□□□ 1.23
CCDC38-201ENST00000344280 PLEKHA7Q6IQ23 1121 aa22.77■■□□□ 1.23
CCDC38-201ENST00000344280 ATXN2LQ8WWM7 1075 aaKnown RBP22.77■■□□□ 1.23
CCDC38-201ENST00000344280 WDR90Q96KV7 1748 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 TLR3O15455 904 aaKnown RBP22.76■■□□□ 1.23
CCDC38-201ENST00000344280 TCF7P36402 384 aaPredicted RBP22.76■■□□□ 1.23
CCDC38-201ENST00000344280 PTK6Q13882 451 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 TNFAIP8L3Q5GJ75 292 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 LIN9Q5TKA1 542 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 MICALCLQ6ZW33 695 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 PHF13Q86YI8 300 aaPredicted RBP22.76■■□□□ 1.23
CCDC38-201ENST00000344280 ZNF606Q8WXB4 792 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 SEC16BQ96JE7 1060 aa22.76■■□□□ 1.23
CCDC38-201ENST00000344280 TMEM109Q9BVC6 243 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms