RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 ZNF24P17028 368 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 ADCY8P40145 1251 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 IKQ13123 557 aaPredicted RBP19.23■□□□□ 0.67
PKP3-201ENST00000331563 ASPRV1Q53RT3 343 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 SGO2Q562F6 1265 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 CYP4F22Q6NT55 531 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L6PQ6QN14 398 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 NINJ2Q9NZG7 142 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 WHRNQ9P202 907 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 DCTN4Q9UJW0 460 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 GYG2O15488 501 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 EDIL3O43854 480 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 GCNT3O95395 438 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 MOGSQ13724 837 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 GIT2Q14161 759 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 RFX8Q6ZV50 586 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 NLRP9Q7RTR0 991 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 HAS1Q92839 578 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 MRRFQ96E11 262 aaKnown RBP19.23■□□□□ 0.67
PKP3-201ENST00000331563 IDI2Q9BXS1 227 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 ANAPC5Q9UJX4 755 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 POTEFA5A3E0 1075 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 TMEM221A6NGB7 291 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 KRT15P19012 456 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 ITIH2P19823 946 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 ACSBG2Q5FVE4 666 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 ZNF746Q6NUN9 644 aaPredicted RBP19.22■□□□□ 0.67
PKP3-201ENST00000331563 POTEGQ6S5H5 508 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 POTEEQ6S8J3 1075 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 SMC1BQ8NDV3 1235 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 SNF8Q96H20 258 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 MIPEPQ99797 713 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 SPATA16Q9BXB7 569 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 CADM1Q9BY67 442 aaKnown RBP19.22■□□□□ 0.67
PKP3-201ENST00000331563 SMCHD1A6NHR9 2005 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 COL4A5P29400 1685 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 PLIN4Q96Q06 1357 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 MROH7Q68CQ1 1323 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 CFAP69A5D8W1 941 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 MEIS1O00470 390 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 CLDN3O15551 220 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 TPD52L2O43399 206 aaKnown RBP19.22■□□□□ 0.67
PKP3-201ENST00000331563 TBX10O75333 385 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 ZYXQ15942 572 aaKnown RBP19.22■□□□□ 0.67
PKP3-201ENST00000331563 ARSHQ5FYA8 562 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 SLFN13Q68D06 897 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 TSPAN18Q96SJ8 248 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 CIDEBQ9UHD4 219 aa19.22■□□□□ 0.67
PKP3-201ENST00000331563 RPL26L1Q9UNX3 145 aaKnown RBP19.22■□□□□ 0.67
PKP3-201ENST00000331563 PDXKO00764 312 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ATMINO43313 823 aaPredicted RBP19.21■□□□□ 0.67
PKP3-201ENST00000331563 ETS2P15036 469 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 CHRNB2P17787 502 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ECE1P42892 770 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 LSAMPQ13449 338 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ABCB5Q2M3G0 1257 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 USH1GQ495M9 461 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 SH2D4BQ5SQS7 431 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 FYB2Q5VWT5 728 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 DYDC2Q96IM9 177 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 BTBD6Q96KE9 485 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 HAPLN3Q96S86 360 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 DHX36Q9H2U1 1008 aaKnown RBP19.21■□□□□ 0.67
PKP3-201ENST00000331563 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.21■□□□□ 0.671e-6■■■■■ 306.7
PKP3-201ENST00000331563 CCDC22O60826 627 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 POTEJP0CG39 1038 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ATF2P15336 505 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 STAT3P40763 770 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 NT5C2P49902 561 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ERFP50548 548 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ZNF568Q3ZCX4 644 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 C11orf63Q6NUN7 778 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 FAM186BQ8IYM0 893 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 C4orf33Q8N1A6 199 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 GATA6Q92908 595 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 HIC2Q96JB3 615 aa19.21■□□□□ 0.67
PKP3-201ENST00000331563 ZNF184Q99676 751 aaPredicted RBP19.21■□□□□ 0.67
PKP3-201ENST00000331563 RANBP17Q9H2T7 1088 aaKnown RBP19.21■□□□□ 0.67
PKP3-201ENST00000331563 LARSQ9P2J5 1176 aaKnown RBP19.21■□□□□ 0.67
PKP3-201ENST00000331563 POC1B-GALNT4F8VUJ3 575 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 HNRNPRO43390 633 aaKnown RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 EDF1O60869 148 aaKnown RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 PSMG1O95456 288 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 ASMTLO95671 621 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 CA4P22748 312 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 GPC5P78333 572 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 TSHZ1Q6ZSZ6 1077 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 SLC20A1Q8WUM9 679 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 ATG4AQ8WYN0 398 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 DDX27Q96GQ7 796 aaKnown RBP19.2■□□□□ 0.66
PKP3-201ENST00000331563 ADAM33Q9BZ11 813 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 TMEM39BQ9GZU3 492 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 COMMD3-BMI1R4GMX3 469 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 PNMA6FA0A0J9YX94 578 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 F5H6K3 240 aa19.2■□□□□ 0.66
PKP3-201ENST00000331563 TRAFD1O14545 582 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms