RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 ITGB3P05106 788 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 CREB1P16220 341 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 ACAD10Q6JQN1 1059 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 CALN1Q9BXU9 219 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 CXCL16Q9H2A7 254 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 STXBP5LQ9Y2K9 1186 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 IVNS1ABPQ9Y6Y0 642 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-201ENST00000326335 MYCP01106 439 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-201ENST00000326335 YBX3P16989 372 aaKnown RBP eCLIP11.34□□□□□ -0.593e-7■□□□□ 8.4
CUL4A-201ENST00000326335 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-201ENST00000326335 ZNF365Q70YC5 407 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 SLC13A5Q86YT5 568 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-201ENST00000326335 ZBTB8OSQ8IWT0 167 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 ARHGAP28Q9P2N2 729 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 RBPJLQ9UBG7 517 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 RNF14Q9UBS8 474 aa11.34□□□□□ -0.59
CUL4A-201ENST00000326335 MAGED2Q9UNF1 606 aaPredicted RBP11.34□□□□□ -0.59
CUL4A-201ENST00000326335 POC1B-GALNT4F8VUJ3 575 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 EBAG9O00559 213 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 KRT1P04264 644 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 NFICP08651 508 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 VIMP08670 466 aaKnown RBP11.33□□□□□ -0.6
CUL4A-201ENST00000326335 INSRRP14616 1297 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ECHS1P30084 290 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 CHKAP35790 457 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 RABGGTBP53611 331 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 MAP3K10Q02779 954 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ALCAMQ13740 583 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 FAM160B1Q5W0V3 765 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 NIPA1Q7RTP0 329 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ANKS1BQ7Z6G8 1248 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 GLIS1Q8NBF1 620 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ZNF606Q8WXB4 792 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 LRRC45Q96CN5 670 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 CISHQ9NSE2 258 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 RASAL2Q9UJF2 1139 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 GOLGA8KD6RF30 607 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 DKC1O60832 514 aaKnown RBP eCLIP11.33□□□□□ -0.62e-6■■■□□ 19.1
CUL4A-201ENST00000326335 IQCF3P0C7M6 154 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 GCLCP48506 637 aaPredicted RBP11.33□□□□□ -0.6
CUL4A-201ENST00000326335 RAB6CQ53S08 254 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 MCOLN2Q8IZK6 566 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 IQCKQ8N0W5 287 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 C12orf29Q8N999 325 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 RNF169Q8NCN4 708 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ATP6V1G3Q96LB4 118 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 MIS12Q9H081 205 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 RAB6CQ9H0N0 254 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 RAB17Q9H0T7 212 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 UBE4BO95155 1302 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ECEL1O95672 775 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 PMS2P54278 862 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 CLEC16AQ2KHT3 1053 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 ZACNQ401N2 412 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 DPY19L2Q6NUT2 758 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 TMC3Q7Z5M5 1100 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 CPLX4Q7Z7G2 160 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 WHAMMQ8TF30 809 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 TFAP2BQ92481 460 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 HEXIM2Q96MH2 286 aaKnown RBP11.33□□□□□ -0.6
CUL4A-201ENST00000326335 SYNPO2Q9UMS6 1093 aa11.33□□□□□ -0.6
CUL4A-201ENST00000326335 MYPNQ86TC9 1320 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 RGS16O15492 202 aaPredicted RBP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 YY1P25490 414 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 GLE1Q53GS7 698 aaKnown RBP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 DNAJC24Q6P3W2 148 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 ANKMY2Q8IV38 441 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 CARD9Q9H257 536 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 SMYD3Q9H7B4 428 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 CCDC188H7C350 402 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 PDGFRBP09619 1106 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 AARSP49588 968 aaKnown RBP eCLIP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 GPC3P51654 580 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 NEDD9Q14511 834 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 TAF5Q15542 800 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 LIN9Q5TKA1 542 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 ATF7IP2Q5U623 682 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 ZC3H18Q86VM9 953 aaKnown RBP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 SETD4Q9NVD3 440 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 GPATCH2LQ9NWQ4 482 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 MROH7Q68CQ1 1323 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 ADCY3O60266 1144 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 LSP1P33241 339 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 COILP38432 576 aaPredicted RBP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 PTENP60484 403 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 SLFN11Q7Z7L1 901 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 SAMD3Q8N6K7 520 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 MFSD14AQ96MC6 490 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 MRPL4Q9BYD3 311 aaKnown RBP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 ADARB2Q9NS39 739 aaKnown RBP11.32□□□□□ -0.6
CUL4A-201ENST00000326335 NR2E3Q9Y5X4 410 aa11.32□□□□□ -0.6
CUL4A-201ENST00000326335 SGK1O00141 431 aa11.31□□□□□ -0.6
CUL4A-201ENST00000326335 DYNC1LI2O43237 492 aaPredicted RBP11.31□□□□□ -0.6
CUL4A-201ENST00000326335 AKAP5P24588 427 aa11.31□□□□□ -0.6
CUL4A-201ENST00000326335 EPHX2P34913 555 aa11.31□□□□□ -0.6
CUL4A-201ENST00000326335 SH3PXD2AQ5TCZ1 1133 aa11.31□□□□□ -0.6
CUL4A-201ENST00000326335 ALS2CLQ60I27 953 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms