RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 SMYD5Q6GMV2 418 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 TMEM270Q6UE05 265 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 RIOX2Q8IUF8 465 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 RHOT1Q8IXI2 618 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 RBBP8NLQ8NC74 664 aaPredicted RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 C1orf54Q8WWF1 131 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 LRRC4CQ9HCJ2 640 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 FARP2O94887 1054 aaPredicted RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 EDNRBP24530 442 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 CAV1Q03135 178 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 PLEKHA7Q6IQ23 1121 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 RAPGEF5Q92565 580 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 IMPG2Q9BZV3 1241 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 ROPN1BQ9BZX4 212 aaPredicted RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 TRIM7Q9C029 511 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 DCLK3Q9C098 648 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 ROPN1Q9HAT0 212 aaPredicted RBP23.81■■□□□ 1.4
PNKP-201ENST00000322344 GPRC5DQ9NZD1 345 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 CD2APQ9Y5K6 639 aa23.81■■□□□ 1.4
PNKP-201ENST00000322344 STAT5BP51692 787 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 EFNA5P52803 228 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 CAPSQ13938 189 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 OTUD6BQ8N6M0 293 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 SNF8Q96H20 258 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 FAM167AQ96KS9 214 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 PCYT2Q99447 389 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 C11orf70Q9BRQ4 267 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 UMODL1Q5DID0 1318 aa23.8■■□□□ 1.4
PNKP-201ENST00000322344 MAFO75444 373 aaPredicted RBP23.79■■□□□ 1.4
PNKP-201ENST00000322344 TGFB3P10600 412 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 NCOA4Q13772 614 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 ZBTB41Q5SVQ8 909 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 BRSK2Q8IWQ3 736 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 KATNAL2Q8IYT4 538 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 ASIC3Q9UHC3 531 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 WDR90Q96KV7 1748 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 C5orf60A6NFR6 353 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 MMP13P45452 471 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 FSTL1Q12841 308 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 MAMLD1Q13495 774 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 ATL2Q8NHH9 583 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 AZI2Q9H6S1 392 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 CHST7Q9NS84 486 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 NUB1Q9Y5A7 615 aa23.79■■□□□ 1.4
PNKP-201ENST00000322344 TLDC2A0PJX2 215 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 THAP12O43422 761 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 FGFR4P22455 802 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 SNX1Q13596 522 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 TTC31Q49AM3 519 aaPredicted RBP23.78■■□□□ 1.4
PNKP-201ENST00000322344 RHBDF2Q6PJF5 856 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 WDR49Q8IV35 697 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 OR5B17Q8NGF7 314 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 SEPT1Q8WYJ6 367 aa23.78■■□□□ 1.4
PNKP-201ENST00000322344 USP2O75604 605 aaPredicted RBP23.77■■□□□ 1.4
PNKP-201ENST00000322344 ZNF132P52740 706 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 ZNF568Q3ZCX4 644 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 ERMARDQ5T6L9 678 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 MFSD5Q6N075 450 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 UBR7Q8N806 425 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 XPO6Q96QU8 1125 aaKnown RBP23.77■■□□□ 1.4
PNKP-201ENST00000322344 MRPL4Q9BYD3 311 aaKnown RBP23.77■■□□□ 1.4
PNKP-201ENST00000322344 PARVAQ9NVD7 372 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 SNCAIPQ9Y6H5 919 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 GOLGB1Q14789 3259 aaKnown RBP23.77■■□□□ 1.4
PNKP-201ENST00000322344 RASGRF2O14827 1237 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 GAS2O43903 313 aaKnown RBP23.77■■□□□ 1.4
PNKP-201ENST00000322344 CETN2P41208 172 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 KLF1Q13351 362 aaPredicted RBP23.77■■□□□ 1.4
PNKP-201ENST00000322344 SURF1Q15526 300 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 CCNG2Q16589 344 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 IER5Q5VY09 327 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 PHLDB2Q86SQ0 1253 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 PASD1Q8IV76 773 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 CCDC50Q8IVM0 306 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 EXOC8Q8IYI6 725 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 MICALL1Q8N3F8 863 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 BBOF1Q8ND07 529 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 EXD1Q8NHP7 514 aa23.77■■□□□ 1.4
PNKP-201ENST00000322344 A0A0G2JMZ2 1700 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 TOM1L1O75674 476 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 EDN1P05305 212 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 TNFAIP8L3Q5GJ75 292 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 METTL7BQ6UX53 244 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 MMS22LQ6ZRQ5 1243 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 FEZF2Q8TBJ5 459 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 TCP11Q8WWU5 503 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 BTBD7Q9P203 1132 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 IP6K2Q9UHH9 426 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 SOWAHBA6NEL2 793 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 TLR3O15455 904 aaKnown RBP23.76■■□□□ 1.39
PNKP-201ENST00000322344 ASS1P00966 412 aaKnown RBP23.76■■□□□ 1.39
PNKP-201ENST00000322344 CFHP08603 1231 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 ATF2P15336 505 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 TREML2Q5T2D2 321 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 LLGL2Q6P1M3 1020 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 C6orf89Q6UWU4 347 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 CCDC25Q86WR0 208 aa23.76■■□□□ 1.39
PNKP-201ENST00000322344 CDC42EP4Q9H3Q1 356 aaKnown RBP23.76■■□□□ 1.39
PNKP-201ENST00000322344 LSM8O95777 96 aaKnown RBP23.75■■□□□ 1.39
PNKP-201ENST00000322344 RALAP11233 206 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms