RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 SLC12A6Q9UHW9 1150 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 PDE4DIPQ5VU43 2346 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 SUPT3HB4E1H0 165 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 HSD17B3P37058 310 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 KCNMA1Q12791 1236 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 SMTNL2Q2TAL5 461 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ATG14Q6ZNE5 492 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 RNF139Q8WU17 664 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 CEP44Q9C0F1 390 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.94
USF3-201ENST00000316407 ANXA13P27216 316 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 TTC30AQ86WT1 665 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 FAM111AQ96PZ2 611 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 OLFM1Q99784 485 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 PUS3Q9BZE2 481 aaKnown RBP9.15□□□□□ -0.95
USF3-201ENST00000316407 AGPAT5Q9NUQ2 364 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 DDX56Q9NY93 547 aaKnown RBP9.15□□□□□ -0.95
USF3-201ENST00000316407 CASZ1Q86V15 1759 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 ZBTB24O43167 697 aaPredicted RBP9.15□□□□□ -0.95
USF3-201ENST00000316407 ABCB5Q2M3G0 1257 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 FAM102AQ5T9C2 384 aaPredicted RBP9.15□□□□□ -0.95
USF3-201ENST00000316407 ANKRD49Q8WVL7 239 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 USP13Q92995 863 aaPredicted RBP9.15□□□□□ -0.95
USF3-201ENST00000316407 TMEM206Q9H813 350 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 SCN3BQ9NY72 215 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 PSD3Q9NYI0 1048 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 KIF28PB7ZC32 967 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 POLR1BQ9H9Y6 1135 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 MOSPD1Q9UJG1 213 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 CHKBQ9Y259 395 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 MROH7-TTC4A0A0A0MT08 1334 aa9.15□□□□□ -0.95
USF3-201ENST00000316407 TRIM24O15164 1050 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 FEN1P39748 380 aaKnown RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 ATAD3BQ5T9A4 648 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 CYFIP1Q7L576 1253 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 LRRC71Q8N4P6 559 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 SAC3D1A6NKF1 404 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 F8VZ95 297 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 C21orf59P57076 290 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 COX10Q12887 443 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 TFDP1Q14186 410 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 STAT4Q14765 748 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 C3orf62Q6ZUJ4 267 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 SIK2Q9H0K1 926 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 RWDD3Q9Y3V2 267 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ABCB11O95342 1321 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 BCL10O95999 233 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 MTTPP55157 894 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 FMR1Q06787 632 aaKnown RBP eCLIP9.14□□□□□ -0.95
USF3-201ENST00000316407 TTC39BQ5VTQ0 682 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 GCOM2Q9BZD3 368 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 CLEC4MQ9H2X3 399 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 C15orf41Q9Y2V0 281 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 PHF2O75151 1096 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ETS2P15036 469 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 TRAPPC3LQ5T215 181 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 CITED4Q96RK1 184 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 IL13P35225 146 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 RASGRF1Q13972 1273 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 GDPD5Q8WTR4 605 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 PNMA8BQ9ULN7 279 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 ARID1BQ8NFD5 2236 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 KCNQ3O43525 872 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 BCAR1P56945 870 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 EEPD1Q7L9B9 569 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 AFG1LQ8WV93 481 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 KRT6BP04259 564 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 KRT6CP48668 564 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 SLFN13Q68D06 897 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 MCEEQ96PE7 176 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 KIFC1Q9BW19 673 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 CSTF3Q12996 717 aaKnown RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 PDZK1Q5T2W1 519 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 MFN1Q8IWA4 741 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 TRIM63Q969Q1 353 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 PCDHGA3Q9Y5H0 932 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 SEMA3EO15041 775 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ZNF284Q2VY69 593 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ARID3BQ8IVW6 561 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 ENKURQ8TC29 256 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 CASKIN2Q8WXE0 1202 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 CENPTQ96BT3 561 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ERLEC1Q96DZ1 483 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 UNC13DQ70J99 1090 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ZNF467Q7Z7K2 595 aaPredicted RBP9.14□□□□□ -0.95
USF3-201ENST00000316407 GANCQ8TET4 914 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 RFFLQ8WZ73 363 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 AMNQ9BXJ7 453 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 ATAD3AQ9NVI7 634 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 PHTF1Q9UMS5 762 aa9.14□□□□□ -0.95
USF3-201ENST00000316407 GRAP2O75791 330 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 TXNRD1Q16881 649 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 CCNI2Q6ZMN8 369 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 APLFQ8IW19 511 aaPredicted RBP9.13□□□□□ -0.95
USF3-201ENST00000316407 RAD21L1Q9H4I0 556 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 M0QYV0 167 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 APOL1O14791 398 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 CCND2P30279 289 aa9.13□□□□□ -0.95
USF3-201ENST00000316407 R3HDM1Q15032 1099 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms