RNA–Protein interactions for RNA: ENST00000310421.4

VCPIP1-201, Transcript of valosin containing protein interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPIP1, Length 9,942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPIP1-201ENST00000310421 NCOA4Q13772 614 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 SNRNP35Q16560 246 aaKnown RBP11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 C16orf89Q6UX73 402 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 TMEM51Q9NW97 253 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 CCDC88AQ3V6T2 1871 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 UBXN8O00124 270 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 P4HA2O15460 535 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM28Q13263 835 aaKnown RBP11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 TMEM259Q4ZIN3 620 aa11.89□□□□□ -0.51
VCPIP1-201ENST00000310421 ENTPD3O75355 529 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SNAP25P60880 206 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 MAGOHP61326 146 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ATP6V1G3Q96LB4 118 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 HEMGNQ9BXL5 484 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 MYH15Q9Y2K3 1946 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 TBC1D4O60343 1298 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SRGAP2O75044 1071 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 CYP2D6P10635 497 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 NEK2P51955 445 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 GTF2A2P52657 109 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 TRIM60Q495X7 471 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 BEND6Q5SZJ8 279 aaPredicted RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 RNF180Q86T96 592 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 NT5C1AQ9BXI3 368 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 PKP3Q9Y446 797 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ZW10O43264 779 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 HSPA9P38646 679 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 TMED1Q13445 227 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 RSAD1Q9HA92 442 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SYTL2Q9HCH5 934 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ARHGEF28Q8N1W1 1705 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SEC31AO94979 1220 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 LAMC2Q13753 1193 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 LLGL1Q15334 1064 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 CNGA3Q16281 694 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 PCYOX1LQ8NBM8 494 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 RNPC3Q96LT9 517 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 PSMC3IPQ9P2W1 217 aaPredicted RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 DIP2CQ9Y2E4 1556 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 IPPQ9Y573 584 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 PRAMEF22A3QJZ6 481 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 RSPH10B2B2RC85 870 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 RSPH10BP0C881 870 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 VCPP55072 806 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 LATS2Q9NRM7 1088 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 PCSK1NQ9UHG2 260 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 CCSER1Q9C0I3 900 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 APOA1P02647 267 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 PNMA6AP0CW24 399 aaPredicted RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ANXA11P50995 505 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 NCALDP61601 193 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 IZUMO3Q5VZ72 239 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 AFF4Q9UHB7 1163 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 CDY2AQ9Y6F7 541 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 CDY1Q9Y6F8 540 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 USP31Q70CQ4 1352 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SLIT1O75093 1534 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ATXN8OSP0DMR3 200 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 TWF1Q12792 350 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 TSGA10IPQ3SY00 556 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 FRMD8P1Q9BZ68 369 aaPredicted RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ZC3H7BQ9UGR2 993 aaKnown RBP11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 SPACA6W5XKT8 324 aa11.88□□□□□ -0.51
VCPIP1-201ENST00000310421 ANKRD26Q9UPS8 1709 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 OOSP2Q86WS3 158 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 DTX3LQ8TDB6 740 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 PKD2L2Q9NZM6 624 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 PREPLQ4J6C6 727 aaPredicted RBP11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 EEF2KO00418 725 aaKnown RBP11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 STAG3L1P0CL83 205 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 MYL2P10916 166 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 FAM9CQ8IZT9 166 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 TTC7AQ9ULT0 858 aaPredicted RBP11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 C16orf96A6NNT2 1141 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 MOCS2O96007 188 aaPredicted RBP11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 C6orf222P0C671 652 aaPredicted RBP11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 GARTP22102 1010 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 ARFIP2P53365 341 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 PLD1Q13393 1074 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 LRRC8EQ6NSJ5 796 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 RPAINQ86UA6 219 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 UCMAQ8WVF2 138 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 RGL1Q9NZL6 768 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 EXTL3O43909 919 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 VPS72Q15906 364 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 PPP4R4Q6NUP7 873 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 SETD3Q86TU7 594 aaPredicted RBP11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 AGPAT1Q99943 283 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 POLBP06746 335 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 FMO5P49326 533 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 DMTNQ08495 405 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 CD302Q8IX05 232 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 NMT2O60551 498 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 ITGA4P13612 1032 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 CMTM5Q96DZ9 223 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 PLEKHA8Q96JA3 519 aa11.87□□□□□ -0.51
VCPIP1-201ENST00000310421 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms