RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 PEX26Q7Z412 305 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 DNAAF5Q86Y56 855 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ANKRD13BQ86YJ7 626 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 SRRM1Q8IYB3 904 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CMTR1Q8N1G2 835 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 MORC4Q8TE76 937 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 EFHD2Q96C19 240 aaPredicted RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 CDK5RAP3Q96JB5 506 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ZFRQ96KR1 1074 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ANKRD2Q9GZV1 360 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 NAPBQ9H115 298 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ERVK-5Q9HDB9 667 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 MAN1C1Q9NR34 630 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 TBC1D23Q9NUY8 699 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 MRGBPQ9NV56 204 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 GIN1Q9NXP7 522 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 MTRF1LQ9UGC7 380 aaKnown RBP9.74□□□□□ -0.85
PDGFC-201ENST00000274071 PCDHGB4Q9UN71 923 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 PCDHGB5Q9Y5G0 923 aa9.74□□□□□ -0.85
PDGFC-201ENST00000274071 ENPP1P22413 925 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 HIRAP54198 1017 aaPredicted RBP9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ACTR3P61158 418 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 FOLH1Q04609 750 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 EFTUD2Q15029 972 aaKnown RBP eCLIP9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF568Q3ZCX4 644 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 MAP3K21Q5TCX8 1036 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 DCLRE1AQ6PJP8 1040 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 RNF111Q6ZNA4 994 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 SPATA5Q8NB90 893 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 RNF169Q8NCN4 708 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 OR7G1Q8NGA0 311 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 IGDCC4Q8TDY8 1250 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 PIGBQ92521 554 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 CTRCQ99895 268 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 TUBB6Q9BUF5 446 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 GID8Q9NWU2 228 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 TBK1Q9UHD2 729 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ZBTB21Q9ULJ3 1066 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 NEU2Q9Y3R4 380 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 NWD2Q9ULI1 1742 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 FAM187AA6NFU0 413 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 BTNL10A8MVZ5 291 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 RHOBTB3O94955 611 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 STAMBPO95630 424 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 RARBP10826 455 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 PON1P27169 355 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 UBA7P41226 1012 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 RPS3AP61247 264 aaKnown RBP9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ARID5AQ03989 594 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 MAPK7Q13164 816 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 IL17AQ16552 155 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 SIGIRRQ6IA17 410 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 NIPAL1Q6NVV3 410 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 OSTM1Q86WC4 334 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 CCDC25Q86WR0 208 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 LZTR1Q8N653 840 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 FAM172AQ8WUF8 416 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 EME1Q96AY2 570 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 RUNDC3BQ96NL0 473 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 BIRC8Q96P09 236 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ZBTB3Q9H5J0 574 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ZFYVE28Q9HCC9 887 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 GINM1Q9NU53 330 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 HOXC10Q9NYD6 342 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 THEGQ9P2T0 379 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 ECM29Q5VYK3 1845 aa9.73□□□□□ -0.85
PDGFC-201ENST00000274071 SLC26A4O43511 780 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ITM2AO43736 263 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 MUTP22033 750 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PRKACBP22694 351 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PCYT1AP49585 367 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TUBA4AP68366 448 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PTPN12Q05209 780 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TLR1Q15399 786 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 RABL6Q3YEC7 729 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 USP43Q70EL4 1123 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 EPM2AIP1Q7L775 607 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 NET1Q7Z628 596 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 NLRP10Q86W26 655 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 TPCN2Q8NHX9 752 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PRR11Q96HE9 360 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 HES6Q96HZ4 224 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 MRPS26Q9BYN8 205 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ZNF287Q9HBT7 754 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 COPRSQ9NQ92 184 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 KANSL3Q9P2N6 904 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 RSL24D1Q9UHA3 163 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 GRID1Q9ULK0 1009 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 DISP2A7MBM2 1401 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 BICDL2A1A5D9 508 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 PFDN6O15212 129 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 AQP9O43315 295 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 MAGEC1O60732 1142 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 MTRF1O75570 445 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 ENO2P09104 434 aaPredicted RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 CD48P09326 243 aa9.72□□□□□ -0.85
PDGFC-201ENST00000274071 POLR2EP19388 210 aaKnown RBP9.72□□□□□ -0.85
PDGFC-201ENST00000274071 SLC16A2P36021 539 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms