RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 M0QZ92 97 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SEC31AO94979 1220 aaKnown RBP13.44□□□□□ -0.26
CAPN9-201ENST00000271971 TNNC2P02585 160 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 CHRNA1P02708 482 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 KRT19P08727 400 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 KRT5P13647 590 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 THPOP40225 353 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 GRM5P41594 1212 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 GCNT1Q02742 428 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 ZSCAN26Q16670 478 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SESTD1Q86VW0 696 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 ANKRD36BP1Q96IX9 119 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SYT11Q9BT88 431 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 FUT8Q9BYC5 575 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 TRIM6Q9C030 488 aaPredicted RBP13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SEPT11Q9NVA2 429 aaKnown RBP13.44□□□□□ -0.26
CAPN9-201ENST00000271971 RSPH14Q9UHP6 348 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 TRPV2Q9Y5S1 764 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 MRFAP1Q9Y605 127 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 SCN1AP35498 2009 aa13.44□□□□□ -0.26
CAPN9-201ENST00000271971 TMCO5BA8MYB1 307 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 ASS1P00966 412 aaKnown RBP13.43□□□□□ -0.26
CAPN9-201ENST00000271971 AKAP5P24588 427 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 CASQ1P31415 396 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 AP3M2P53677 418 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 KIF5AQ12840 1032 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 CUL2Q13617 745 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 NOP9Q86U38 636 aaKnown RBP13.43□□□□□ -0.26
CAPN9-201ENST00000271971 SLC35F6Q8N357 371 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 C1orf127Q8N9H9 656 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 EPS8L1Q8TE68 723 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 HNRNPLLQ8WVV9 542 aaKnown RBP13.43□□□□□ -0.26
CAPN9-201ENST00000271971 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
CAPN9-201ENST00000271971 UNC93B1Q9H1C4 597 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 SIX4Q9UIU6 781 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 SALL4Q9UJQ4 1053 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 NAGPAQ9UK23 515 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 CCDC151A5D8V7 595 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 MAP2K7O14733 419 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 TRIM66O15016 1216 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 KRT86O43790 486 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 RPS6KA5O75582 802 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 ITGB3P05106 788 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 PRMT2P55345 433 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 TRPC3Q13507 836 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 GLRA4Q5JXX5 417 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 SCARA5Q6ZMJ2 495 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 U2AF1L4Q8WU68 220 aaKnown RBP13.43□□□□□ -0.26
CAPN9-201ENST00000271971 GLT1D1Q96MS3 346 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 IMPG2Q9BZV3 1241 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.43□□□□□ -0.26
CAPN9-201ENST00000271971 NOD1Q9Y239 953 aa13.43□□□□□ -0.26
CAPN9-201ENST00000271971 A0A1W2PQ45 241 aaPredicted RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 A0A1W2PQY0 241 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 RECQL4O94761 1208 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 TMEM132DQ14C87 1099 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 PCBP1Q15365 356 aaKnown RBP eCLIP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 ZNF699Q32M78 642 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 UBXN11Q5T124 520 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 ALKBH5Q6P6C2 394 aaKnown RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 VPS36Q86VN1 386 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 XYLT2Q9H1B5 865 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 TAS2R14Q9NYV8 317 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 NOCTQ9UK39 431 aaKnown RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 NENFQ9UMX5 172 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 CCDC172P0C7W6 258 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 MGAT3Q09327 533 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 NFX1Q12986 1120 aaKnown RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 TUBB2AQ13885 445 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 MTFR1Q15390 333 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 TWF2Q6IBS0 349 aaKnown RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 RPUSD2Q8IZ73 545 aaKnown RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 GOLGA1Q92805 767 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 KIF12Q96FN5 646 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 SNX27Q96L92 541 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
CAPN9-201ENST00000271971 AGPAT1Q99943 283 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 TUBB2BQ9BVA1 445 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 RNF39Q9H2S5 420 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 ASB7Q9H672 318 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 KLK14Q9P0G3 267 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 CAPN6Q9Y6Q1 641 aa13.42□□□□□ -0.26
CAPN9-201ENST00000271971 MOXD2PA6NHM9 499 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 MYO1CO00159 1063 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 CHRNB2P17787 502 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 ACO1P21399 889 aaKnown RBP13.41□□□□□ -0.26
CAPN9-201ENST00000271971 AXLP30530 894 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 NAB2Q15742 525 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 KYAT1Q16773 422 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 ZNF662Q6ZS27 426 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 ENOSF1Q7L5Y1 443 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 FMNL3Q8IVF7 1028 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 PARD6BQ9BYG5 372 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 AGO3Q9H9G7 860 aaKnown RBP13.41□□□□□ -0.26
CAPN9-201ENST00000271971 POLIQ9UNA4 740 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 ST3GAL5Q9UNP4 418 aa13.41□□□□□ -0.26
CAPN9-201ENST00000271971 BUB1O43683 1085 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms