RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 LAMC2Q13753 1193 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 USP10Q14694 798 aaKnown RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 SNX17Q15036 470 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 AASDHQ4L235 1098 aaPredicted RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 SNX30Q5VWJ9 437 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 OTOAQ7RTW8 1153 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 POMGNT2Q8NAT1 580 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 DCAF4Q8WV16 495 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 ADAM33Q9BZ11 813 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 GGT7Q9UJ14 662 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 CACNB3P54284 484 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 NCF4Q15080 339 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 RCN1Q15293 331 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 RTKN2Q8IZC4 609 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 FRMD6Q96NE9 622 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 UVRAGQ9P2Y5 699 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 PCDHB6Q9Y5E3 794 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 COL17A1Q9UMD9 1497 aaPredicted RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 UGGT2Q9NYU1 1516 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 HEATR9A2RTY3 570 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 IQCA1LA6NCM1 817 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 RHOBTB1O94844 696 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 RRM2P31350 389 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 COG2Q14746 738 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 SFR1Q86XK3 245 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 CLYBLQ8N0X4 340 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 OR8H2Q8N162 312 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 WWP1Q9H0M0 922 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 PCCAP05165 728 aaPredicted RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 CCNE1P24864 410 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 ALDH1A3P47895 512 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 TNIP3Q96KP6 325 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 APPL1Q9UKG1 709 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 EDC4Q6P2E9 1401 aaKnown RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 A0A1W2PQ27 194 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 A0A1W2PQ64 194 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 A0A1W2PQD8 194 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 FOSL2P15408 326 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 UBE3CQ15386 1083 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 CNGA2Q16280 664 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 OTUD5Q96G74 571 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 A2MP01023 1474 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 KCNK10P57789 538 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 CAMKK1Q8N5S9 505 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 MRPL48Q96GC5 212 aaKnown RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 NARS2Q96I59 477 aaKnown RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 L3MBTL3Q96JM7 780 aaPredicted RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 HDAC6Q9UBN7 1215 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 ZMYM4Q5VZL5 1548 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 ENO2P09104 434 aaPredicted RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 EIF4A1P60842 406 aaKnown RBP11.91□□□□□ -0.5
PTPN4-201ENST00000263708 MTHFD1LQ6UB35 978 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 ADI1Q9BV57 179 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 CTSHP09668 335 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 ARHGAP15Q53QZ3 475 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 C19orf18Q8NEA5 215 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 POLD4Q9HCU8 107 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 PCMTD2Q9NV79 361 aa11.91□□□□□ -0.5
PTPN4-201ENST00000263708 KIAA0586Q9BVV6 1533 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 GPC1P35052 558 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 MAPK9P45984 424 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 ARF5P84085 180 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 RHOT1Q8IXI2 618 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 OLFM1Q99784 485 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 COQ7Q99807 217 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 ECSITQ9BQ95 431 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 PLIN5Q00G26 463 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 POU4F1Q01851 419 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 LAMB3Q13751 1172 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 MOSPD2Q8NHP6 518 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 CCDC3Q9BQI4 270 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 XPO7Q9UIA9 1087 aaKnown RBP11.9□□□□□ -0.5
PTPN4-201ENST00000263708 C21orf2O43822 256 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 PGS1Q32NB8 556 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 LONP2Q86WA8 852 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 PHACTR4Q8IZ21 702 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 TTLL6Q8N841 843 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 THTPAQ9BU02 230 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 POTEMA6NI47 508 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 RGS2P41220 211 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 TAP1Q03518 808 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 RASGRF1Q13972 1273 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 MGAT5BQ3V5L5 792 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 TMC4Q7Z404 712 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 GLMNQ92990 594 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 ADAM21Q9UKJ8 722 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 GALNTL6Q49A17 601 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 NEUROD4Q9HD90 331 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 SEC31BQ9NQW1 1179 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 PSMD3O43242 534 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 CYP7B1O75881 506 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 HSMCR30P0CW71 290 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 CHRM3P20309 590 aa11.9□□□□□ -0.5
PTPN4-201ENST00000263708 CYP51A1Q16850 503 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms