RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 HOMER2Q9NSB8 354 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 USP20Q9Y2K6 914 aa18.53■□□□□ 0.56
TRAM1-201ENST00000262213 ATF7P17544 494 aaPredicted RBP18.52■□□□□ 0.56
TRAM1-201ENST00000262213 MUTP22033 750 aa18.52■□□□□ 0.56
TRAM1-201ENST00000262213 CA4P22748 312 aa18.52■□□□□ 0.56
TRAM1-201ENST00000262213 CNGA1P29973 690 aa18.52■□□□□ 0.56
TRAM1-201ENST00000262213 RPA3P35244 121 aaPredicted RBP18.52■□□□□ 0.56
TRAM1-201ENST00000262213 NSFP46459 744 aaKnown RBP18.52■□□□□ 0.56
TRAM1-201ENST00000262213 MTM1Q13496 603 aa18.52■□□□□ 0.56
TRAM1-201ENST00000262213 PCNX4Q63HM2 1172 aa18.52■□□□□ 0.56
TRAM1-201ENST00000262213 B3GNT9Q6UX72 402 aa18.52■□□□□ 0.56
TRAM1-201ENST00000262213 TAB3Q8N5C8 712 aaPredicted RBP18.52■□□□□ 0.56
TRAM1-201ENST00000262213 GOLGA8SH3BPF8 625 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 GOLGA8MH3BSY2 632 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 BANF1O75531 89 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 QARSP47897 775 aaKnown RBP18.52■□□□□ 0.55
TRAM1-201ENST00000262213 C12orf56Q8IXR9 622 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 MAML1Q92585 1016 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 YIPF3Q9GZM5 350 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 KIAA1586Q9HCI6 787 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 COL20A1Q9P218 1284 aa18.52■□□□□ 0.55
TRAM1-201ENST00000262213 DENND3A2RUS2 1198 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 TCEA3O75764 348 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 PDHA1P08559 390 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 FDX1P10109 184 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 ALCAMQ13740 583 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 SPOPLQ6IQ16 392 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 TRABD2AQ86V40 505 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 TTC8Q8TAM2 541 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 CNKSR1Q969H4 720 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 ACSF2Q96CM8 615 aaPredicted RBP18.51■□□□□ 0.55
TRAM1-201ENST00000262213 GRAMD1AQ96CP6 724 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 RIT2Q99578 217 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 TCEAL9Q9UHQ7 104 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 TBX20Q9UMR3 447 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 ZNF148Q9UQR1 794 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 A0A1W2PPM1 405 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 CLRN2A0PK11 232 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 ENO4A6NNW6 628 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 MAPK13O15264 365 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 SMNDC1O75940 238 aaKnown RBP eCLIP18.51■□□□□ 0.55
TRAM1-201ENST00000262213 ASMTLO95671 621 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 GM2AP17900 193 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 GPC3P51654 580 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 FAM13CQ8NE31 585 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 LRRC8CQ8TDW0 803 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 NAF1Q96HR8 494 aaKnown RBP18.51■□□□□ 0.55
TRAM1-201ENST00000262213 PRMT6Q96LA8 375 aaPredicted RBP18.51■□□□□ 0.55
TRAM1-201ENST00000262213 NUDCD1Q96RS6 583 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 NEU2Q9Y3R4 380 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 USH1CQ9Y6N9 552 aa18.51■□□□□ 0.55
TRAM1-201ENST00000262213 QSER1Q2KHR3 1735 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 EP400Q96L91 3159 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 UNGP13051 313 aaPredicted RBP18.5■□□□□ 0.55
TRAM1-201ENST00000262213 GCAP28676 217 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 SESN3P58005 492 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 ACVR2BQ13705 512 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 SPARCL1Q14515 664 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 SLC1A5Q15758 541 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 ANKMY2Q8IV38 441 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 CPXCR1Q8N123 301 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 FAM213AQ9BRX8 229 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 OSBPL1AQ9BXW6 950 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 LTBP1Q14766 1721 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 LY75O60449 1722 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 NFIBO00712 420 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 PCK1P35558 622 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 HHATQ5VTY9 493 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 SEPT12Q8IYM1 358 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 SMC6Q96SB8 1091 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 TBC1D10AQ9BXI6 508 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 C12orf65Q9H3J6 166 aaKnown RBP18.5■□□□□ 0.55
TRAM1-201ENST00000262213 DNPEPQ9ULA0 475 aa18.5■□□□□ 0.55
TRAM1-201ENST00000262213 ATRNL1Q5VV63 1379 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 SRCAPQ6ZRS2 3230 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 ECE2O60344 883 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 ENTPD5O75356 428 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 PROSCO94903 275 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 MYBL1P10243 752 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 TCF4P15884 667 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 NOP14P78316 857 aaKnown RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 CENPCQ03188 943 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 GPS1Q13098 491 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 KLF1Q13351 362 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 ZBED8Q8IZ13 594 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 BICD1Q96G01 975 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 CFAP57Q96MR6 1250 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 GLIS2Q9BZE0 524 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 NPHS2Q9NP85 383 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 C1orf112Q9NSG2 853 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 DCTN4Q9UJW0 460 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 STARD13Q9Y3M8 1113 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 MYPNQ86TC9 1320 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 DHX15O43143 795 aaKnown RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 PEX11AO75192 247 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 IFNB1P01574 187 aa18.49■□□□□ 0.55
TRAM1-201ENST00000262213 MYCLP12524 364 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 PECAM1P16284 738 aaPredicted RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 SKIV2L2P42285 1042 aaKnown RBP18.49■□□□□ 0.55
TRAM1-201ENST00000262213 NPTX2P47972 431 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms