RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 ITIH2P19823 946 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 BFSP2Q13515 415 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 MAP1SQ66K74 1059 aaPredicted RBP15.83■□□□□ 0.12
UBE4B-201ENST00000253251 KIAA0895Q8NCT3 520 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 TACC3Q9Y6A5 838 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 ZMYM2Q9UBW7 1377 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 A0A0A6YYK5 440 aaPredicted RBP15.83■□□□□ 0.12
UBE4B-201ENST00000253251 MEIS2O14770 477 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 PRLRP16471 622 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 GRIK1P39086 918 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 IFNAR2P48551 515 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 SULT1E1P49888 294 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 TPD52P55327 224 aaPredicted RBP15.83■□□□□ 0.12
UBE4B-201ENST00000253251 SPARCL1Q14515 664 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 REPS2Q8NFH8 660 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 SLC30A5Q8TAD4 765 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 PSMD10O75832 226 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 LAMTOR4Q0VGL1 99 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 NME3Q13232 169 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 IZUMO3Q5VZ72 239 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 NXNQ6DKJ4 435 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 SHCBP1Q8NEM2 672 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 UBN1Q9NPG3 1134 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 SENP1Q9P0U3 644 aa15.83■□□□□ 0.12
UBE4B-201ENST00000253251 NID2Q14112 1375 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 AKAP3O75969 853 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 ODC1P11926 461 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 GPD1P21695 349 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 NNMTP40261 264 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 SLCO1A2P46721 670 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 TPI1P60174 286 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 EIF3EP60228 445 aaKnown RBP15.82■□□□□ 0.12
UBE4B-201ENST00000253251 BOLA3Q53S33 107 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 KRT35Q92764 455 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 MTG1Q9BT17 334 aaPredicted RBP15.82■□□□□ 0.12
UBE4B-201ENST00000253251 TRAIPQ9BWF2 469 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 VIPAS39Q9H9C1 493 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 PACSIN2Q9UNF0 486 aaPredicted RBP15.82■□□□□ 0.12
UBE4B-201ENST00000253251 ANGPTL3Q9Y5C1 460 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 PLIN4Q96Q06 1357 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 MAPK13O15264 365 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 ITGB3P05106 788 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.82■□□□□ 0.12
UBE4B-201ENST00000253251 PPP2R3CQ969Q6 453 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 IFT43Q96FT9 208 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 ALG6Q9Y672 507 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 AKR1A1P14550 325 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 RAB27AP51159 221 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 SLC12A3P55017 1021 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 TMEM62Q0P6H9 643 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 COLEC11Q9BWP8 271 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 FRMD8Q9BZ67 464 aaPredicted RBP15.82■□□□□ 0.12
UBE4B-201ENST00000253251 ASB7Q9H672 318 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 SP110Q9HB58 689 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 CPA4Q9UI42 421 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 DSEQ9UL01 958 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 LOC102724159A0A0B4J2E5 919 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 MTSS1O43312 755 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 TAC1P20366 129 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 STX1BP61266 288 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 PSMC6P62333 389 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 FUT2Q10981 343 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 STAT4Q14765 748 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 PWP2Q15269 919 aaKnown RBP15.82■□□□□ 0.12
UBE4B-201ENST00000253251 HDAC11Q96DB2 347 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 CYP39A1Q9NYL5 469 aa15.82■□□□□ 0.12
UBE4B-201ENST00000253251 FAM200BP0CF97 657 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 KLK7P49862 253 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 KRT17Q04695 432 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 MAPK8IP2Q13387 824 aaPredicted RBP15.81■□□□□ 0.12
UBE4B-201ENST00000253251 NYAP1Q6ZVC0 841 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 COG1Q8WTW3 980 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 MCEEQ96PE7 176 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 VCX3BQ9H321 246 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 DPYSL4O14531 572 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 ADCY3O60266 1144 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 ADORA2AP29274 412 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 CASP4P49662 377 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 RAD51Q06609 339 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 LAMB3Q13751 1172 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 P3H1Q32P28 736 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 MMGT1Q8N4V1 131 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 CYP2W1Q8TAV3 490 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 TJP2Q9UDY2 1190 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 COPEO14579 308 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 CTIFO43310 598 aaKnown RBP15.81■□□□□ 0.12
UBE4B-201ENST00000253251 INSRRP14616 1297 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 TRMT10CQ7L0Y3 403 aaKnown RBP15.81■□□□□ 0.12
UBE4B-201ENST00000253251 MAP4K3Q8IVH8 894 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 RRAGCQ9HB90 399 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 ITGA11Q9UKX5 1188 aa15.81■□□□□ 0.12
UBE4B-201ENST00000253251 FOXN3O00409 490 aaPredicted RBP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 ACKR2O00590 384 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 PSTPIP1O43586 416 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 WEE2P0C1S8 567 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 COMTP21964 271 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 ANO4Q32M45 955 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 LMNTD2Q8IXW0 634 aa15.8■□□□□ 0.12
UBE4B-201ENST00000253251 DDX27Q96GQ7 796 aaKnown RBP15.8■□□□□ 0.12
UBE4B-201ENST00000253251 OSBPL8Q9BZF1 889 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms