RNA–Protein interactions for RNA: ENST00000243253.7

SEC61A1-201, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A1, Length 3,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-201ENST00000243253 CCHCR1Q8TD31 782 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 BSNDQ8WZ55 320 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 AKT1S1Q96B36 256 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 TBC1D31Q96DN5 1066 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 PAIP2Q9BPZ3 127 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 TRAIPQ9BWF2 469 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 MTUS1Q9ULD2 1270 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 CEP83Q9Y592 693 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 MYH9P35579 1960 aaKnown RBP12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 UNC5CO95185 931 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 CENPCQ03188 943 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 SGO2Q562F6 1265 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 XKR9Q5GH70 373 aa12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 GBP7Q8N8V2 638 aaPredicted RBP12.72□□□□□ -0.37
SEC61A1-201ENST00000243253 WFS1O76024 890 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 ABHD2P08910 425 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 CLTAP09496 248 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 ACO1P21399 889 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 MFAP3P55082 362 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 GCNT1Q02742 428 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 NUGGCQ68CJ6 796 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 KRT39Q6A163 491 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 ERICH1Q86X53 443 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 NLGN1Q8N2Q7 840 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 HEMGNQ9BXL5 484 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 LARSQ9P2J5 1176 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 BAIAP2L1Q9UHR4 511 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 TBX20Q9UMR3 447 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 TCRBV5S1A1TA0A578 114 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 ITGBL1O95965 494 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 TAS2R40P59535 323 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 MKRN3Q13064 507 aaKnown RBP12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 TDRPQ86YL5 185 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 SLC7A6OSQ96CW6 309 aaPredicted RBP12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 ARHGEF10LQ9HCE6 1279 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 ANK1P16157 1881 aa12.71□□□□□ -0.37
SEC61A1-201ENST00000243253 YDJCA8MPS7 323 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 GTF2H1P32780 548 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 MSH2P43246 934 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 YARSP54577 528 aaKnown RBP12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 CAV1Q03135 178 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 TNIP1Q15025 636 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 CTC1Q2NKJ3 1217 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 BZW1Q7L1Q6 419 aaKnown RBP12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 KIF2BQ8N4N8 673 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 NSRP1Q9H0G5 558 aaKnown RBP12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 RAB20Q9NX57 234 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 TBK1Q9UHD2 729 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 CHKBQ9Y259 395 aa12.71□□□□□ -0.38
SEC61A1-201ENST00000243253 PRPF4O43172 522 aaKnown RBP eCLIP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CCNE2O96020 404 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 BRAFP15056 766 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 EZRP15311 586 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CCND1P24385 295 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 YWHABP31946 246 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 ABL2P42684 1182 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 TKFCQ3LXA3 575 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SYCP2LQ5T4T6 812 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SV2AQ7L0J3 742 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 TRABD2AQ86V40 505 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 LDHDQ86WU2 507 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 C4orf19Q8IY42 314 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 KCNN1Q92952 543 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 MASTLQ96GX5 879 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 TGS1Q96RS0 853 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 HERC5Q9UII4 1024 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 STARD13Q9Y3M8 1113 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 TYROBPO43914 113 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SUN1O94901 812 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CNGA1P29973 690 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 DSG3P32926 999 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CCNG2Q16589 344 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CDR2LQ86X02 465 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 KIRREL3Q8IZU9 778 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 ATL2Q8NHH9 583 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 MZB1Q8WU39 189 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 NKX1-2Q9UD57 310 aaPredicted RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CNTN6Q9UQ52 1028 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SPDYE2BA6NHP3 402 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SPDYE6P0CI01 402 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SLC1A1P43005 524 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 OSTNP61366 133 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CYP24A1Q07973 514 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 ZNF252P-AS1Q0IIN9 211 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 SPDYE2Q495Y8 402 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 PCNX4Q63HM2 1172 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 CC2D2BQ6DHV5 1058 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 ANO5Q75V66 913 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 ZCCHC9Q8N567 271 aaKnown RBP12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 GIMAP7Q8NHV1 300 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 LRMDAQ9H2I8 198 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 PTPRJQ12913 1337 aa12.7□□□□□ -0.38
SEC61A1-201ENST00000243253 PIAS1O75925 651 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 MAP3K10Q02779 954 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 CALCOCO2Q13137 446 aa12.69□□□□□ -0.38
SEC61A1-201ENST00000243253 PARP6Q2NL67 630 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms