RNA–Protein interactions for RNA: ENST00000221494.9

SF3A2-201, Transcript of splicing factor 3a subunit 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SF3A2, Length 1,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-201ENST00000221494 IVDP26440 423 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 ALDH3A1P30838 453 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 CYP2J2P51589 502 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 MRPS35P82673 323 aaKnown RBP16.93■□□□□ 0.3
SF3A2-201ENST00000221494 LRRC14Q15048 493 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 RASA2Q15283 850 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 UBAP2Q5T6F2 1119 aaKnown RBP16.93■□□□□ 0.3
SF3A2-201ENST00000221494 CHADLQ6NUI6 762 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 ECHDC2Q86YB7 292 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 CPXCR1Q8N123 301 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 UHMK1Q8TAS1 419 aaKnown RBP16.93■□□□□ 0.3
SF3A2-201ENST00000221494 EPS8L1Q8TE68 723 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 CLEC4DQ8WXI8 215 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 ATG4CQ96DT6 458 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 WNK4Q96J92 1243 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 SH3GL3Q99963 347 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 ASIC3Q9UHC3 531 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 ADAMTS5Q9UNA0 930 aa16.93■□□□□ 0.3
SF3A2-201ENST00000221494 TMEM110-MUSTN1A8MSY1 372 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 PRPF4O43172 522 aaKnown RBP eCLIP16.92■□□□□ 0.35e-6■□□□□ 8.1
SF3A2-201ENST00000221494 THAP12O43422 761 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 ACSL3O95573 720 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 TRIM49P0CI25 452 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 TRIM49CP0CI26 452 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 ATF2P15336 505 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 SLC1A1P43005 524 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 TAF11Q15544 211 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 CGB2Q6NT52 195 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 CATSPERGQ6ZRH7 1159 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 LMNTD2Q8IXW0 634 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 ZNF398Q8TD17 642 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 MGARPQ8TDB4 240 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 CLMNQ96JQ2 1002 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 RMDN2Q96LZ7 410 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 NUP85Q9BW27 656 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 PITPNM3Q9BZ71 974 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 ETNK1Q9HBU6 452 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 NINJ2Q9NZG7 142 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 ZFATQ9P243 1243 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 PNMA3Q9UL41 463 aa16.92■□□□□ 0.3
SF3A2-201ENST00000221494 ZNFX1Q9P2E3 1918 aaKnown RBP16.92■□□□□ 0.3
SF3A2-201ENST00000221494 FAM47DPA6NHR8 397 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ZBED4O75132 1171 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 LRRN2O75325 713 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 CHRNB2P17787 502 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 DSG3P32926 999 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 VAMP7P51809 220 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 CYP4A11Q02928 519 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 LBRQ14739 615 aaKnown RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 COG2Q14746 738 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 SGSM1Q2NKQ1 1148 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 TSHZ1Q6ZSZ6 1077 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 OTOP1Q7RTM1 612 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ANKRD13AQ8IZ07 590 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ANKRD42Q8N9B4 389 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 REPS2Q8NFH8 660 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ZNF483Q8TF39 744 aaPredicted RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 PRCCQ92733 491 aaPredicted RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 SLC5A5Q92911 643 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 WDR11Q9BZH6 1224 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 CYP39A1Q9NYL5 469 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 SMG5Q9UPR3 1016 aaKnown RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 STK38LQ9Y2H1 464 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 PTPN22Q9Y2R2 807 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 IGLV3-22A0A075B6J6 115 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 TCRBV7S2A1N4TA0A589 114 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 EML1O00423 815 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 NFIBO00712 420 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 PSMD10O75832 226 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 SLITRK3O94933 977 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 HSD17B4P51659 736 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 CCNHP51946 323 aaPredicted RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 GHRHRQ02643 423 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ZC2HC1CQ53FD0 456 aaPredicted RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 KIF2BQ8N4N8 673 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 CCDC89Q8N998 374 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ATL2Q8NHH9 583 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 MICAL1Q8TDZ2 1067 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 PIGOQ8TEQ8 1089 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 TTC25Q96NG3 672 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ELP3Q9H9T3 547 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 AVENQ9NQS1 362 aaPredicted RBP16.91■□□□□ 0.3
SF3A2-201ENST00000221494 ANAPC5Q9UJX4 755 aa16.91■□□□□ 0.3
SF3A2-201ENST00000221494 EMSYQ7Z589 1322 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 AHCYL1O43865 530 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 FESP07332 822 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 ATP6V1C1P21283 382 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 ZNF76P36508 570 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 MFAP3P55082 362 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 MGAT5Q09328 741 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 ODR4Q5SWX8 454 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 OTUD6AQ7L8S5 288 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 ERO1BQ86YB8 467 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.9■□□□□ 0.3
SF3A2-201ENST00000221494 SHC3Q92529 594 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 TRIM11Q96F44 468 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 PCDHB18PQ96TA0 734 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 TLE6Q9H808 572 aa16.9■□□□□ 0.3
SF3A2-201ENST00000221494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms