RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 ZNFX1Q9P2E3 1918 aaKnown RBP18.36■□□□□ 0.53
USB1-201ENST00000219281 FZD9O00144 591 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 TCEA3O75764 348 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 MYBL1P10243 752 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 ELF1P32519 619 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 NSFP46459 744 aaKnown RBP18.36■□□□□ 0.53
USB1-201ENST00000219281 RPS6P62753 249 aaKnown RBP18.36■□□□□ 0.53
USB1-201ENST00000219281 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 ENOSF1Q7L5Y1 443 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 SRRM1Q8IYB3 904 aaKnown RBP18.36■□□□□ 0.53
USB1-201ENST00000219281 ZNF516Q92618 1163 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 N4BP2L2Q92802 583 aaPredicted RBP18.36■□□□□ 0.53
USB1-201ENST00000219281 C9orf72Q96LT7 481 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 ARL2BPQ9Y2Y0 163 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 NEU2Q9Y3R4 380 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 GJA3Q9Y6H8 435 aa18.36■□□□□ 0.53
USB1-201ENST00000219281 TESPA1A2RU30 521 aaPredicted RBP18.35■□□□□ 0.53
USB1-201ENST00000219281 PROSCO94903 275 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 GJC1P36383 396 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 KLF1Q13351 362 aaPredicted RBP18.35■□□□□ 0.53
USB1-201ENST00000219281 IZUMO3Q5VZ72 239 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 SLC38A10Q9HBR0 1119 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 PCDHB2Q9Y5E7 798 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 ADGRA3Q8IWK6 1321 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 IGF2BP3O00425 579 aaKnown RBP eCLIP18.35■□□□□ 0.53
USB1-201ENST00000219281 HNRNPDLO14979 420 aaKnown RBP18.35■□□□□ 0.53
USB1-201ENST00000219281 GJB6O95452 261 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 CFHP08603 1231 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 SFNP31947 248 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 SSTR3P32745 418 aaPredicted RBP18.35■□□□□ 0.53
USB1-201ENST00000219281 TAS2R40P59535 323 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 BNIP1Q12981 228 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 RIPK1Q13546 671 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 PASD1Q8IV76 773 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 TRIM11Q96F44 468 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 BICD1Q96G01 975 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 CEP170P1Q96L14 293 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 SGIP1Q9BQI5 828 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 LGALS13Q9UHV8 139 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 PNMA3Q9UL41 463 aa18.35■□□□□ 0.53
USB1-201ENST00000219281 SSR1P43307 286 aaKnown RBP18.34■□□□□ 0.53
USB1-201ENST00000219281 COPS2P61201 443 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 KRT76Q01546 638 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 MTMR2Q13614 643 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ZNF268Q14587 947 aaPredicted RBP18.34■□□□□ 0.53
USB1-201ENST00000219281 CCNG2Q16589 344 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ACCSLQ4AC99 568 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 PRAMEF18Q5VWM3 479 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 MON1BQ7L1V2 547 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.34■□□□□ 0.53
USB1-201ENST00000219281 FITM2Q8N6M3 262 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 SPIRE2Q8WWL2 714 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 C11orf70Q9BRQ4 267 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 NTPCRQ9BSD7 190 aaKnown RBP18.34■□□□□ 0.53
USB1-201ENST00000219281 NKIRAS1Q9NYS0 192 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 PRKAG3Q9UGI9 489 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 USTQ9Y2C2 406 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 UMODL1Q5DID0 1318 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 HGSO14964 777 aaPredicted RBP18.34■□□□□ 0.53
USB1-201ENST00000219281 ZC3H11AO75152 810 aaKnown RBP eCLIP18.34■□□□□ 0.53
USB1-201ENST00000219281 CDH16O75309 829 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 CYP1A1P04798 512 aaPredicted RBP18.34■□□□□ 0.53
USB1-201ENST00000219281 CD58P19256 250 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ALDH5A1P51649 535 aaPredicted RBP18.34■□□□□ 0.53
USB1-201ENST00000219281 GHRHRQ02643 423 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 SPOPLQ6IQ16 392 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 CGB2Q6NT52 195 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ARHGEF18Q6ZSZ5 1173 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ANKS1BQ7Z6G8 1248 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ZNF677Q86XU0 584 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 RHOT1Q8IXI2 618 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 KIF2BQ8N4N8 673 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 CCDC89Q8N998 374 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 MAGEB18Q96M61 343 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 RMDN3Q96TC7 470 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 OSBPL8Q9BZF1 889 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 ATP6V0A4Q9HBG4 840 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 FZD1Q9UP38 647 aa18.34■□□□□ 0.53
USB1-201ENST00000219281 GSTTP1A0A1W2PQM5 241 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 PDE4CQ08493 712 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 PTP4A2Q12974 167 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 WDR44Q5JSH3 913 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 GSTA5Q7RTV2 222 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 GBP7Q8N8V2 638 aaPredicted RBP18.33■□□□□ 0.53
USB1-201ENST00000219281 KLHL29Q96CT2 875 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 FAM212AQ96EL1 285 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 STAMBPL1Q96FJ0 436 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 RMDN2Q96LZ7 410 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 CCDC77Q9BR77 488 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 PDCD2LQ9BRP1 358 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 MOV10L1Q9BXT6 1211 aaKnown RBP18.33■□□□□ 0.53
USB1-201ENST00000219281 GABBR1Q9UBS5 961 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 L3MBTL1Q9Y468 752 aa18.33■□□□□ 0.53
USB1-201ENST00000219281 PSTPIP1O43586 416 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 FDX1P10109 184 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 LIN9Q5TKA1 542 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 CYP4F22Q6NT55 531 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 CRELD2Q6UXH1 353 aaPredicted RBP18.33■□□□□ 0.52
USB1-201ENST00000219281 C15orf39Q6ZRI6 1047 aa18.33■□□□□ 0.52
USB1-201ENST00000219281 SAMD3Q8N6K7 520 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms